RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 CD8BP10966 210 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 HSD17B3P37058 310 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 CDKN1AP38936 164 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 EIF1AXP47813 144 aaKnown RBP10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 RNF144AP50876 292 aaPredicted RBP10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 CLCQ05315 142 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 ZNF844Q08AG5 666 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 VEZF1Q14119 521 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 SGCBQ16585 318 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 STAC2Q6ZMT1 411 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 FAM9CQ8IZT9 166 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 SPATA3Q8NHX4 192 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 FBXO30Q8TB52 745 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 TMEM171Q8WVE6 324 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 AKAP1Q92667 903 aaKnown RBP eCLIP10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 ACSS3Q9H6R3 686 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 BRF2Q9HAW0 419 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 SLC35C2Q9NQQ7 365 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 ZDHHC18Q9NUE0 388 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 VPS29Q9UBQ0 182 aa10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 FBN1P35555 2871 aaKnown RBP10.04□□□□□ -0.8
PRKCSH-220ENST00000593104 TRIM49D1C9J1S8 452 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 POC1B-GALNT4F8VUJ3 575 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 UPK1AO00322 258 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 CXCL13O43927 109 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 PLOD3O60568 738 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 SUPT7LO94864 414 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 SOD3P08294 240 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 IL11P20809 199 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 PTNP21246 168 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 SHC1P29353 583 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 TIA1P31483 386 aaKnown RBP eCLIP10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 NCBP2P52298 156 aaKnown RBP eCLIP10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 FOXA1P55317 472 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 TRA2BP62995 288 aaKnown RBP10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 EEF1A1P68104 462 aaKnown RBP10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 CAV1Q03135 178 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 CLEC12BQ2HXU8 276 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 GRAMD1BQ3KR37 738 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 BEX5Q5H9J7 111 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 EEF1A1P5Q5VTE0 462 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 METTL2BQ6P1Q9 378 aaKnown RBP10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 FAM214BQ7L5A3 538 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 CCDC91Q7Z6B0 441 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 ZAR1Q86SH2 424 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 EXOC3L1Q86VI1 746 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 PHC2Q8IXK0 858 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 METTL25Q8N6Q8 603 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 OR10D3Q8NH80 312 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 LILRB1Q8NHL6 650 aaPredicted RBP10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 PIK3R3Q92569 461 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 OTUB1Q96FW1 271 aaPredicted RBP10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 TMEM237Q96Q45 408 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 PAFAH2Q99487 392 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 ACTR6Q9GZN1 396 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 RAB17Q9H0T7 212 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 EQTNQ9NQ60 294 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 ZNF701Q9NV72 531 aaPredicted RBP10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 POLR3HQ9Y535 204 aaPredicted RBP10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 FBN3Q75N90 2809 aa10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 ANK3Q12955 4377 aaKnown RBP10.03□□□□□ -0.8
PRKCSH-220ENST00000593104 FREM1Q5H8C1 2179 aa10.02□□□□□ -0.8
PRKCSH-220ENST00000593104 UQCRHLA0A096LP55 91 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 CCDC189A1A4V9 331 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 RNF212BA8MTL3 300 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 TNFSF11O14788 317 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 HS3ST1O14792 307 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 CLOCKO15516 846 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 DLX3O60479 287 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 BCAS2O75934 225 aaPredicted RBP10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 SOX30O94993 753 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 UTS2O95399 124 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 ANGPTL1O95841 491 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 PLGP00747 810 aaPredicted RBP10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 ACVR1BP36896 505 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 C2orf80Q0P641 193 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 ANKRD26P1Q6NSI1 321 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 MFSD12Q6NUT3 480 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 SH2D5Q6ZV89 423 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 METTL6Q8TCB7 284 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 DCAKDQ8WVC6 231 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 ROBO4Q8WZ75 1007 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 BBS4Q96RK4 519 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 MRPL57Q9BQC6 102 aaKnown RBP10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 PRRG4Q9BZD6 226 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 STMN4Q9H169 189 aaPredicted RBP10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 MRPL46Q9H2W6 279 aaKnown RBP10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 CDC42EP4Q9H3Q1 356 aaKnown RBP10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 GLIPR2Q9H4G4 154 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 GRPEL1Q9HAV7 217 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 TAS2R9Q9NYW1 312 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 TMEM216Q9P0N5 145 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 ZNF175Q9Y473 711 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 SONP18583 2426 aaKnown RBP10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 ZANQ9Y493 2812 aa10.02□□□□□ -0.81
PRKCSH-220ENST00000593104 A0A0J9YW62 118 aa10.01□□□□□ -0.81
PRKCSH-220ENST00000593104 MYO1GB0I1T2 1018 aa10.01□□□□□ -0.81
PRKCSH-220ENST00000593104 INHBAP08476 426 aa10.01□□□□□ -0.81
PRKCSH-220ENST00000593104 ANXA4P09525 319 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms