RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 C5orf46Q6UWT4 87 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 ARSKQ6UWY0 536 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 MFSD7Q6UXD7 560 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 SCARA5Q6ZMJ2 495 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 C15orf39Q6ZRI6 1047 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 GPRIN3Q6ZVF9 776 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 ERN2Q76MJ5 926 aaKnown RBP3.13□□□□□ -1.91
VMP1-212ENST00000591782 PAGE2Q7Z2X7 111 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 VTCN1Q7Z7D3 282 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 CFAP206Q8IYR0 622 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 ZNF679Q8IYX0 411 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 SIX6OS1Q8N1H7 587 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 KDM8Q8N371 416 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 ZNF786Q8N393 782 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 MREGQ8N565 214 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 COMMD1Q8N668 190 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 ZNF383Q8NA42 475 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 MFSD9Q8NBP5 474 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 CATSPER1Q8NEC5 780 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 OR4D10Q8NGI6 311 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 OR2L8Q8NGY9 312 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 FGFBP3Q8TAT2 258 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 GRHL3Q8TE85 626 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 DTD1Q8TEA8 209 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 AGAP11Q8TF27 550 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 GIPC3Q8TF64 312 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 FAM172AQ8WUF8 416 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 MAFIPQ8WZ33 124 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 ELMO1Q92556 727 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 MCUR1Q96AQ8 359 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 RASD2Q96D21 266 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 ECHDC3Q96DC8 303 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 DGCR14Q96DF8 476 aaKnown RBP3.13□□□□□ -1.91
VMP1-212ENST00000591782 EEF2KMTQ96G04 330 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 PDXPQ96GD0 296 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 PPP3R2Q96LZ3 170 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 DUX3Q96PT4 197 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 C11orf70Q9BRQ4 267 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 PDCD10Q9BUL8 212 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 S1PR5Q9H228 398 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 LRRN3Q9H3W5 708 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 Q9H521 79 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 OPA3Q9H6K4 179 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 TDRD3Q9H7E2 651 aaKnown RBP3.13□□□□□ -1.91
VMP1-212ENST00000591782 A4GALTQ9NPC4 353 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 ASCL3Q9NQ33 180 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 TIGARQ9NQ88 270 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 MRPL22Q9NWU5 206 aaKnown RBP3.13□□□□□ -1.91
VMP1-212ENST00000591782 THUMPD1Q9NXG2 353 aaKnown RBP3.13□□□□□ -1.91
VMP1-212ENST00000591782 HAO2Q9NYQ3 351 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 CCDC59Q9P031 241 aaKnown RBP3.13□□□□□ -1.91
VMP1-212ENST00000591782 KLHL8Q9P2G9 620 aaPredicted RBP3.13□□□□□ -1.91
VMP1-212ENST00000591782 ERVK-18Q9QC07 812 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 CTSFQ9UBX1 484 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 ENOPH1Q9UHY7 261 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 SLC24A2Q9UI40 661 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 ANAPC2Q9UJX6 822 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 DIMT1Q9UNQ2 313 aaKnown RBP3.13□□□□□ -1.91
VMP1-212ENST00000591782 TDRKHQ9Y2W6 561 aaKnown RBP3.13□□□□□ -1.91
VMP1-212ENST00000591782 LRRC42Q9Y546 428 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 PUS1Q9Y606 427 aaKnown RBP eCLIP3.13□□□□□ -1.91
VMP1-212ENST00000591782 MAGI1Q96QZ7 1491 aaPredicted RBP3.13□□□□□ -1.91
VMP1-212ENST00000591782 KDM5BQ9UGL1 1544 aa3.13□□□□□ -1.91
VMP1-212ENST00000591782 POLR3AO14802 1390 aaPredicted RBP3.12□□□□□ -1.91
VMP1-212ENST00000591782 NID2Q14112 1375 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 PBRM1Q86U86 1689 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 PLB1Q6P1J6 1458 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 CCDC141Q6ZP82 1450 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 IGLV9-49A0A0B4J1Y8 123 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 A0A1W2PQ67 120 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 PQLC2LA1A4F0 135 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 MFSD2BA6NFX1 497 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 ZNF729A6NN14 1252 aaPredicted RBP3.12□□□□□ -1.91
VMP1-212ENST00000591782 PDZK1P1A8MUH7 402 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 MEI4A8MW99 385 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 SUPT3HB4E1H0 165 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 ERVV-1B6SEH8 477 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 M0QZ92 97 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 M0QZK8 103 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 ZNF701M0R085 212 aaPredicted RBP3.12□□□□□ -1.91
VMP1-212ENST00000591782 SLC33A1O00400 549 aaPredicted RBP3.12□□□□□ -1.91
VMP1-212ENST00000591782 EEF2KO00418 725 aaKnown RBP3.12□□□□□ -1.91
VMP1-212ENST00000591782 CCRL2O00421 344 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 CXCL11O14625 94 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 ACOX3O15254 700 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 MAGEC1O60732 1142 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 ZG16O60844 167 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 DNAJB6O75190 326 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 BCAS1O75363 584 aaPredicted RBP3.12□□□□□ -1.91
VMP1-212ENST00000591782 MT-ATP6P00846 226 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 IFNA6P05013 189 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 FCER2P06734 321 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 PGK2P07205 417 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 YES1P07947 543 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 FRMD6-AS1P0C7T7 363 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 ZDHHC11BP0C7U3 371 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 NQO1P15559 274 aaKnown RBP3.12□□□□□ -1.91
VMP1-212ENST00000591782 PFKFB1P16118 471 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 ERCC2P18074 760 aa3.12□□□□□ -1.91
VMP1-212ENST00000591782 HNRNPA2B1P22626 353 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms