RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 DNASE1L1P49184 302 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 PMP22Q01453 160 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 SNTA1Q13424 505 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 CAPRIN1Q14444 709 aaKnown RBP17.55■□□□□ 0.4
DDX39A-214ENST00000590556 SLC30A6Q6NXT4 461 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 TMEM81Q6P7N7 255 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 ZAR1Q86SH2 424 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 ZNF843Q8N446 348 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 ANKRD27Q96NW4 1050 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 CPPED1Q9BRF8 314 aaPredicted RBP17.55■□□□□ 0.4
DDX39A-214ENST00000590556 DOHHQ9BU89 302 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 ANGPTL4Q9BY76 406 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 PROK2Q9HC23 129 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 KLRF1Q9NZS2 232 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 FLRT3Q9NZU0 649 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 LIPT1Q9Y234 373 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 GMEB1Q9Y692 573 aa17.55■□□□□ 0.4
DDX39A-214ENST00000590556 PRRC2CQ9Y520 2896 aaKnown RBP17.55■□□□□ 0.4
DDX39A-214ENST00000590556 AIM2O14862 343 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 STX11O75558 287 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 SNX4O95219 450 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 CLK3P49761 638 aaKnown RBP17.54■□□□□ 0.4
DDX39A-214ENST00000590556 DSTNP60981 165 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 FADDQ13158 208 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 GRAMD1BQ3KR37 738 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 GPAT3Q53EU6 434 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 FAM180AQ6UWF9 173 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 POGLUT1Q8NBL1 392 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 GRHL3Q8TE85 626 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 ROPN1LQ96C74 230 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 LRRC58Q96CX6 371 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 TAAR6Q96RI8 345 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 THUMPD3Q9BV44 507 aaKnown RBP17.54■□□□□ 0.4
DDX39A-214ENST00000590556 OSBPL11Q9BXB4 747 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 EFCAB1Q9HAE3 211 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 THUMPD1Q9NXG2 353 aaKnown RBP17.54■□□□□ 0.4
DDX39A-214ENST00000590556 ABCG2Q9UNQ0 655 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.54■□□□□ 0.4
DDX39A-214ENST00000590556 CFAP46Q8IYW2 2715 aa17.54■□□□□ 0.4
DDX39A-214ENST00000590556 PINLYPA6NC86 204 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 B8ZZF3 427 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 SUV39H1O43463 412 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 FADS1O60427 444 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 C1QL1O75973 258 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 CRYABP02511 175 aaKnown RBP17.53■□□□□ 0.4
DDX39A-214ENST00000590556 NR2F1P10589 423 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 EVI2BP34910 448 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 HPCAP84074 193 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 INPP5JQ15735 1006 aaPredicted RBP17.53■□□□□ 0.4
DDX39A-214ENST00000590556 FLYWCH1Q4VC44 716 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 FAM91A1Q658Y4 838 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 PACS2Q86VP3 889 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 ZFP62Q8NB50 900 aaPredicted RBP17.53■□□□□ 0.4
DDX39A-214ENST00000590556 OR4C3Q8NH37 302 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 RNF138Q8WVD3 245 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 JSRP1Q96MG2 331 aaPredicted RBP17.53■□□□□ 0.4
DDX39A-214ENST00000590556 FRMD6Q96NE9 622 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 TRNT1Q96Q11 434 aaKnown RBP17.53■□□□□ 0.4
DDX39A-214ENST00000590556 TBL1XR1Q9BZK7 514 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 HOXD1Q9GZZ0 328 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 IKZF5Q9H5V7 419 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 POLE3Q9NRF9 147 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 UBQLN4Q9NRR5 601 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 TUBA8Q9NY65 449 aaPredicted RBP17.53■□□□□ 0.4
DDX39A-214ENST00000590556 P2RX2Q9UBL9 471 aa17.53■□□□□ 0.4
DDX39A-214ENST00000590556 BOKQ9UMX3 212 aaPredicted RBP17.53■□□□□ 0.4
DDX39A-214ENST00000590556 PRAMEF27A3QJZ7 478 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 C2orf72A6NCS6 295 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 TMEM247A6NEH6 219 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 FXYD1O00168 92 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 SCO2O43819 266 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 FCMRO60667 390 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 TRIM3O75382 744 aaPredicted RBP17.52■□□□□ 0.4
DDX39A-214ENST00000590556 NGFRP08138 427 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 GUSBP08236 651 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 HPGDP15428 266 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 GPX2P18283 190 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 TBXA2RP21731 343 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 RFC3P40938 356 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 PTGDSP41222 190 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 MASP1P48740 699 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 MLLT10P55197 1068 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 MTPNP58546 118 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 PLGLB1Q02325 96 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 FUT5Q11128 374 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 FOXO1Q12778 655 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 ART3Q13508 389 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 GPR68Q15743 365 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 SYPL1Q16563 259 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 PRR30Q53SZ7 412 aaPredicted RBP17.52■□□□□ 0.4
DDX39A-214ENST00000590556 NANOGP8Q6NSW7 305 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 OLIG3Q7RTU3 272 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 FITM2Q8N6M3 262 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 ANKFN1Q8N957 763 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 SNRNP40Q96DI7 357 aaKnown RBP17.52■□□□□ 0.4
DDX39A-214ENST00000590556 SH3GL1Q99961 368 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 SLC39A3Q9BRY0 314 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 TRIM8Q9BZR9 551 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 ZNF350Q9GZX5 532 aa17.52■□□□□ 0.4
DDX39A-214ENST00000590556 NANOGQ9H9S0 305 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms