RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 TSPAN2O60636 221 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 SERPINB7O75635 380 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 UGT2B17O75795 530 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 ZFAND5O76080 213 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 NADKO95544 446 aaPredicted RBP10.43□□□□□ -0.74
VMP1-207ENST00000588131 IL33O95760 270 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 HPP00738 406 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 GUSBP08236 651 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 RAP2AP10114 183 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 RPS4Y1P22090 263 aaKnown RBP10.43□□□□□ -0.74
VMP1-207ENST00000588131 Q0VFX4 171 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 ATP1A4Q13733 1029 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 EXT1Q16394 746 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 DECR1Q16698 335 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.43□□□□□ -0.74
VMP1-207ENST00000588131 TBC1D25Q3MII6 688 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 FLYWCH1Q4VC44 716 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 IFI44LQ53G44 452 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 ZNF311Q5JNZ3 666 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 AP1ARQ63HQ0 302 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 DESI1Q6ICB0 168 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 ZNF836Q6ZNA1 936 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 FKBP9P1Q75LS8 142 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 TSEN54Q7Z6J9 526 aaKnown RBP10.43□□□□□ -0.74
VMP1-207ENST00000588131 RAB43Q86YS6 212 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 PQLC1Q8N2U9 271 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 C17orf47Q8NEP4 570 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 OR4D11Q8NGI4 311 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 OR8K3Q8NH51 312 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 M1APQ8TC57 530 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 APOBEC4Q8WW27 367 aaKnown RBP10.43□□□□□ -0.74
VMP1-207ENST00000588131 LRTOMTQ8WZ04 291 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 TP53INP1Q96A56 240 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 KIAA1143Q96AT1 154 aaPredicted RBP10.43□□□□□ -0.74
VMP1-207ENST00000588131 HSPBAP1Q96EW2 488 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 WFDC6Q9BQY6 131 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 SCNM1Q9BWG6 230 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 MTHFD2LQ9H903 347 aaPredicted RBP10.43□□□□□ -0.74
VMP1-207ENST00000588131 MMP25Q9NPA2 562 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 POLE3Q9NRF9 147 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 STX18Q9P2W9 335 aaKnown RBP10.43□□□□□ -0.74
VMP1-207ENST00000588131 RIMS3Q9UJD0 308 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 ANGPTL2Q9UKU9 493 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 ZNF443Q9Y2A4 671 aaPredicted RBP10.43□□□□□ -0.74
VMP1-207ENST00000588131 CHST2Q9Y4C5 530 aa10.43□□□□□ -0.74
VMP1-207ENST00000588131 AGAP5A6NIR3 686 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 CLDN24A6NM45 220 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 NPIPB9F8W1W9 429 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 hCG_2039718K7EN88 272 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 ACOX3O15254 700 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 HNRNPRO43390 633 aaKnown RBP10.42□□□□□ -0.74
VMP1-207ENST00000588131 MAN1A2O60476 641 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 FESP07332 822 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 ITGAMP11215 1152 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 CYP4B1P13584 511 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 ATP6V1C1P21283 382 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 ABCD3P28288 659 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 DCTP40126 519 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 MAGEA2P43356 314 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 OR1E2P47887 323 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 SESN3P58005 492 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 EEF1A1P68104 462 aaKnown RBP10.42□□□□□ -0.74
VMP1-207ENST00000588131 VLDLRP98155 873 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 PLCXD2Q0VAA5 305 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 CLN3Q13286 438 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 PUM1Q14671 1186 aaKnown RBP eCLIP10.42□□□□□ -0.74
VMP1-207ENST00000588131 IQCCQ4KMZ1 466 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 ATP1A1-AS1Q5TC04 95 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 TCTN3Q6NUS6 607 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 ERMP1Q7Z2K6 904 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 LACC1Q8IV20 430 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 PEX5LQ8IYB4 626 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 SLC34A3Q8N130 599 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 TMEM102Q8N9M5 508 aaPredicted RBP10.42□□□□□ -0.74
VMP1-207ENST00000588131 OR5L2Q8NGL0 311 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 VANGL1Q8TAA9 524 aaPredicted RBP10.42□□□□□ -0.74
VMP1-207ENST00000588131 SPPL2AQ8TCT8 520 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 LZICQ8WZA0 190 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 POP5Q969H6 163 aaKnown RBP10.42□□□□□ -0.74
VMP1-207ENST00000588131 NACC2Q96BF6 587 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 OMA1Q96E52 524 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 C7orf34Q96L11 122 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 ZNF354BQ96LW1 612 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 G6PC3Q9BUM1 346 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 EFHD1Q9BUP0 239 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 SPATA5L1Q9BVQ7 753 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 PINK1Q9BXM7 581 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 DEFB126Q9BYW3 111 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 WDR70Q9NW82 654 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 BAG5Q9UL15 447 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 ABCG2Q9UNQ0 655 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 SH3GLB1Q9Y371 365 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 PCDHGA10Q9Y5H3 936 aa10.42□□□□□ -0.74
VMP1-207ENST00000588131 M0R3H8 397 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 FRS3O43559 492 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 BCAS1O75363 584 aaPredicted RBP10.41□□□□□ -0.74
VMP1-207ENST00000588131 REM1O75628 298 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 DIRAS1O95057 198 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 LGI1O95970 557 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 FABP3P05413 133 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms