RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 OR2L13Q8N349 312 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 OR5M1Q8NGP8 315 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 FNDC9Q8TBE3 224 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 C1GALT1C1Q96EU7 318 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 PIK3IP1Q96FE7 263 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 ZNF845Q96IR2 970 aaPredicted RBP17.44■□□□□ 0.38
TRAF4-216ENST00000586813 PIP5K1AQ99755 562 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 PTGES2Q9H7Z7 377 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 ZNF395Q9H8N7 513 aaPredicted RBP17.44■□□□□ 0.38
TRAF4-216ENST00000586813 Q9N2J8 555 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 MID1IP1Q9NPA3 183 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 DDX18Q9NVP1 670 aaKnown RBP17.44■□□□□ 0.38
TRAF4-216ENST00000586813 ELOVL5Q9NYP7 299 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 GRID1Q9ULK0 1009 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 ARID1AO14497 2285 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 OR2M5A3KFT3 312 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 GOLGA8RI6L899 631 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 LINC01387J3KSC0 135 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 UBFD1O14562 309 aaKnown RBP17.43■□□□□ 0.38
TRAF4-216ENST00000586813 EMC8O43402 210 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 SMPD2O60906 423 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 CGAP01215 116 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 NTSP30990 170 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 CLDN20P56880 219 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 PON3Q15166 354 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 GLE1Q53GS7 698 aaKnown RBP17.43■□□□□ 0.38
TRAF4-216ENST00000586813 FAM71E1Q6IPT2 247 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 P3H2Q8IVL5 708 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 LRRC75A-AS1Q8N1F1 130 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRAF4-216ENST00000586813 PIGTQ969N2 578 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 PIGQQ9BRB3 760 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 SLC39A3Q9BRY0 314 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 GLIPR2Q9H4G4 154 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 MYNNQ9NPC7 610 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 TAS2R7Q9NYW3 318 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 ZNF175Q9Y473 711 aa17.43■□□□□ 0.38
TRAF4-216ENST00000586813 IL33O95760 270 aa17.42■□□□□ 0.38
TRAF4-216ENST00000586813 HEXAP06865 529 aa17.42■□□□□ 0.38
TRAF4-216ENST00000586813 CD8BP10966 210 aa17.42■□□□□ 0.38
TRAF4-216ENST00000586813 KCNJ5P48544 419 aa17.42■□□□□ 0.38
TRAF4-216ENST00000586813 FGFBP1Q14512 234 aa17.42■□□□□ 0.38
TRAF4-216ENST00000586813 ZNHIT3Q15649 155 aaPredicted RBP17.42■□□□□ 0.38
TRAF4-216ENST00000586813 IMPG1Q17R60 797 aa17.42■□□□□ 0.38
TRAF4-216ENST00000586813 MARCH3Q86UD3 253 aa17.42■□□□□ 0.38
TRAF4-216ENST00000586813 MNS1Q8NEH6 495 aa17.42■□□□□ 0.38
TRAF4-216ENST00000586813 ACMSDQ8TDX5 336 aa17.42■□□□□ 0.38
TRAF4-216ENST00000586813 DUSP19Q8WTR2 217 aa17.42■□□□□ 0.38
TRAF4-216ENST00000586813 ELP4Q96EB1 424 aa17.42■□□□□ 0.38
TRAF4-216ENST00000586813 AMDHD1Q96NU7 426 aa17.42■□□□□ 0.38
TRAF4-216ENST00000586813 CCL19Q99731 98 aa17.42■□□□□ 0.38
TRAF4-216ENST00000586813 LMF2Q9BU23 707 aaKnown RBP17.42■□□□□ 0.38
TRAF4-216ENST00000586813 UBTD1Q9HAC8 227 aa17.42■□□□□ 0.38
TRAF4-216ENST00000586813 MRTO4Q9UKD2 239 aaKnown RBP17.42■□□□□ 0.38
TRAF4-216ENST00000586813 POLR3HQ9Y535 204 aaPredicted RBP17.42■□□□□ 0.38
TRAF4-216ENST00000586813 FAM171A2A8MVW0 826 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 C16orf97H3BN30 126 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 GSTA1P08263 222 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 FPR1P21462 350 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 RFX3P48380 749 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 CLK3P49761 638 aaKnown RBP17.41■□□□□ 0.38
TRAF4-216ENST00000586813 PSMD4P55036 377 aaKnown RBP17.41■□□□□ 0.38
TRAF4-216ENST00000586813 GUSBP1Q15486 140 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 ACKR1Q16570 336 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 TRMT10CQ7L0Y3 403 aaKnown RBP17.41■□□□□ 0.38
TRAF4-216ENST00000586813 ZNF550Q7Z398 422 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 METTL25Q8N6Q8 603 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 CCNYL1Q8N7R7 359 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 ZNF610Q8N9Z0 462 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 GFM2Q969S9 779 aaKnown RBP17.41■□□□□ 0.38
TRAF4-216ENST00000586813 ARSGQ96EG1 525 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 COX4I2Q96KJ9 171 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 MARK4Q96L34 752 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 HS3ST6Q96QI5 342 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 TBL1XR1Q9BZK7 514 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 AP4B1Q9Y6B7 739 aa17.41■□□□□ 0.38
TRAF4-216ENST00000586813 IGLV3-32A0A0A0MS00 114 aa17.4■□□□□ 0.38
TRAF4-216ENST00000586813 RIPK2O43353 540 aa17.4■□□□□ 0.38
TRAF4-216ENST00000586813 UTS2O95399 124 aa17.4■□□□□ 0.38
TRAF4-216ENST00000586813 PYGBP11216 843 aa17.4■□□□□ 0.38
TRAF4-216ENST00000586813 FCGR2AP12318 317 aa17.4■□□□□ 0.38
TRAF4-216ENST00000586813 RPS3AP61247 264 aaKnown RBP17.4■□□□□ 0.38
TRAF4-216ENST00000586813 OCRLQ01968 901 aa17.4■□□□□ 0.38
TRAF4-216ENST00000586813 TMEM44Q2T9K0 475 aa17.4■□□□□ 0.38
TRAF4-216ENST00000586813 GLYR1Q49A26 553 aaPredicted RBP17.4■□□□□ 0.38
TRAF4-216ENST00000586813 IKBIPQ70UQ0 350 aa17.4■□□□□ 0.38
TRAF4-216ENST00000586813 TRIM46Q7Z4K8 759 aa17.4■□□□□ 0.38
TRAF4-216ENST00000586813 GGNQ86UU5 652 aa17.4■□□□□ 0.38
TRAF4-216ENST00000586813 FAM76AQ8TAV0 307 aa17.4■□□□□ 0.38
TRAF4-216ENST00000586813 CCDC126Q96EE4 140 aa17.4■□□□□ 0.38
TRAF4-216ENST00000586813 ZC3HAV1LQ96H79 300 aaKnown RBP17.4■□□□□ 0.38
TRAF4-216ENST00000586813 EMCNQ9ULC0 261 aa17.4■□□□□ 0.38
TRAF4-216ENST00000586813 PROCRQ9UNN8 238 aa17.4■□□□□ 0.38
TRAF4-216ENST00000586813 WBP11Q9Y2W2 641 aaKnown RBP17.4■□□□□ 0.38
TRAF4-216ENST00000586813 FN1P02751 2386 aaKnown RBP17.4■□□□□ 0.38
TRAF4-216ENST00000586813 DNHD1Q96M86 4753 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 G3V2L1 256 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 GMFGO60234 142 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 RSL1D1O76021 490 aaKnown RBP17.39■□□□□ 0.37
TRAF4-216ENST00000586813 AQP8O94778 261 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms