RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 KLHL28Q9NXS3 571 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 ZNF223Q9UK11 482 aaPredicted RBP11.71□□□□□ -0.53
VMP1-202ENST00000585847 FBXL4Q9UKA2 621 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 SLC9A8Q9Y2E8 581 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 HEMK1Q9Y5R4 338 aaPredicted RBP11.71□□□□□ -0.53
VMP1-202ENST00000585847 GPC6Q9Y625 555 aaPredicted RBP11.71□□□□□ -0.53
VMP1-202ENST00000585847 SAGE2PA6NJ88 616 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 B8ZZF3 427 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 HRKO00198 91 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 ADAMDEC1O15204 470 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 ACOX3O15254 700 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 STX11O75558 287 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 SEC24DO94855 1032 aaPredicted RBP11.7□□□□□ -0.54
VMP1-202ENST00000585847 ZNF682O95780 498 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 DDAH2O95865 285 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 CBX7O95931 251 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 CLPSP04118 112 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 SEMG1P04279 462 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 BCHEP06276 602 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 ENDOUP21128 410 aaKnown RBP11.7□□□□□ -0.54
VMP1-202ENST00000585847 PRKAR1BP31321 381 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 IFNA8P32881 189 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 PRKAG1P54619 331 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 SMIM11AP58511 58 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 SLC26A5P58743 744 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 LTB4RQ15722 352 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 PAPD4Q6PIY7 484 aaKnown RBP11.7□□□□□ -0.54
VMP1-202ENST00000585847 CYP4Z1Q86W10 505 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 C10orf111Q8N326 155 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 ZNF321PQ8N8H1 164 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 COX18Q8N8Q8 333 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 OR8K3Q8NH51 312 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 SPPL2AQ8TCT8 520 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 XAGE5Q8WWM1 108 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 THAP4Q8WY91 577 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 KAT2AQ92830 837 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 EME1Q96AY2 570 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 SLCO4A1Q96BD0 722 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 HSH2DQ96JZ2 352 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 RDH12Q96NR8 316 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 BTBD9Q96Q07 612 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 PINK1Q9BXM7 581 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 KLHL4Q9C0H6 718 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 ZNF350Q9GZX5 532 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 SAP130Q9H0E3 1048 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 SERHL2Q9H4I8 314 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 Q9H521 79 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 PNO1Q9NRX1 252 aaKnown RBP11.7□□□□□ -0.54
VMP1-202ENST00000585847 SEC14L3Q9UDX4 400 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 SLC13A4Q9UKG4 626 aa11.7□□□□□ -0.54
VMP1-202ENST00000585847 MYO18BQ8IUG5 2567 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 C17orf105B2RV13 164 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 CLOCKO15516 846 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 HPP00738 406 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 HPRP00739 348 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 IGKV3-11P04433 115 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 IFNW1P05000 195 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 DBIP07108 87 aaKnown RBP11.69□□□□□ -0.54
VMP1-202ENST00000585847 NUDT7P0C024 238 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 OR12D1P0DN82 309 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 TNNI3P19429 210 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 S1PR1P21453 382 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 POU6F2P78424 691 aaPredicted RBP11.69□□□□□ -0.54
VMP1-202ENST00000585847 MRPS35P82673 323 aaKnown RBP11.69□□□□□ -0.54
VMP1-202ENST00000585847 CHAF1BQ13112 559 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 DUSP8Q13202 625 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 LARS2Q15031 903 aaKnown RBP11.69□□□□□ -0.54
VMP1-202ENST00000585847 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.69□□□□□ -0.54
VMP1-202ENST00000585847 DEFB109BQ30KR1 87 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 CYP27C1Q4G0S4 372 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 LIN52Q52LA3 116 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 DCAF10Q5QP82 559 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 RNF220Q5VTB9 566 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 DHRS4L2Q6PKH6 230 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 FAM111BQ6SJ93 734 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 RNF111Q6ZNA4 994 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 NDUFAF7Q7L592 441 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 HIPK1Q86Z02 1210 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 CMIPQ8IY22 773 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 PEX5LQ8IYB4 626 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 TMEM102Q8N9M5 508 aaPredicted RBP11.69□□□□□ -0.54
VMP1-202ENST00000585847 APCDD1LQ8NCL9 501 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 SIMC1Q8NDZ2 872 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 TOR1AIP2Q8NFQ8 470 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 OR52R1Q8NGF1 315 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 FBXO30Q8TB52 745 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 ZNF721Q8TF20 911 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 DNAJC9Q8WXX5 260 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 MAL2Q969L2 176 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 VSTM2LQ96N03 204 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 ZNF184Q99676 751 aaPredicted RBP11.69□□□□□ -0.54
VMP1-202ENST00000585847 HOXD1Q9GZZ0 328 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 OR10A5Q9H207 317 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 ZNF160Q9HCG1 818 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 NKX1-2Q9UD57 310 aaPredicted RBP11.69□□□□□ -0.54
VMP1-202ENST00000585847 ZNF232Q9UNY5 417 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 POLHQ9Y253 713 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 KCNMB2Q9Y691 235 aa11.69□□□□□ -0.54
VMP1-202ENST00000585847 CPAMD8Q8IZJ3 1885 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 NSG1A0A0A6YYJ2 146 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms