RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CAPRIN1Q14444 709 aaKnown RBP13□□□□□ -0.33
SDF2-202ENST00000585428 SPIN4Q56A73 249 aa13□□□□□ -0.33
SDF2-202ENST00000585428 RAET1LQ5VY80 246 aa13□□□□□ -0.33
SDF2-202ENST00000585428 PLEKHM3Q6ZWE6 761 aa13□□□□□ -0.33
SDF2-202ENST00000585428 FAM9CQ8IZT9 166 aa13□□□□□ -0.33
SDF2-202ENST00000585428 METTL6Q8TCB7 284 aa13□□□□□ -0.33
SDF2-202ENST00000585428 C1GALT1C1Q96EU7 318 aa13□□□□□ -0.33
SDF2-202ENST00000585428 ZC3HAV1LQ96H79 300 aaKnown RBP13□□□□□ -0.33
SDF2-202ENST00000585428 ZNF382Q96SR6 550 aa13□□□□□ -0.33
SDF2-202ENST00000585428 PAFAH2Q99487 392 aa13□□□□□ -0.33
SDF2-202ENST00000585428 SHCBP1LQ9BZQ2 653 aa13□□□□□ -0.33
SDF2-202ENST00000585428 PTGES2Q9H7Z7 377 aa13□□□□□ -0.33
SDF2-202ENST00000585428 ZNF701Q9NV72 531 aaPredicted RBP13□□□□□ -0.33
SDF2-202ENST00000585428 ADAM21Q9UKJ8 722 aa13□□□□□ -0.33
SDF2-202ENST00000585428 ABCG2Q9UNQ0 655 aa13□□□□□ -0.33
SDF2-202ENST00000585428 AP4B1Q9Y6B7 739 aa13□□□□□ -0.33
SDF2-202ENST00000585428 IGLV3-32A0A0A0MS00 114 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 TRIM49D1C9J1S8 452 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 INAFM1C9JVW0 142 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 UPK1AO00322 258 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 DLX3O60479 287 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 PSMG1O95456 288 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 IL33O95760 270 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 DDCP20711 480 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 ETF1P62495 437 aaKnown RBP12.99□□□□□ -0.33
SDF2-202ENST00000585428 ACSM2AQ08AH3 577 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.99□□□□□ -0.33
SDF2-202ENST00000585428 ACSM2BQ68CK6 577 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 APOOLQ6UXV4 268 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 MARCH3Q86UD3 253 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 OR2L13Q8N349 312 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 KLHL4Q9C0H6 718 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 CDC42EP4Q9H3Q1 356 aaKnown RBP12.99□□□□□ -0.33
SDF2-202ENST00000585428 GIMAP4Q9NUV9 329 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 FAM120CQ9NX05 1096 aaKnown RBP12.99□□□□□ -0.33
SDF2-202ENST00000585428 TMEM216Q9P0N5 145 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 PROCRQ9UNN8 238 aa12.99□□□□□ -0.33
SDF2-202ENST00000585428 ZANQ9Y493 2812 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 H3BML4 177 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 SEC14L5O43304 696 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 COQ9O75208 318 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 SLITRK5O94991 958 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 ANXA4P09525 319 aaPredicted RBP12.98□□□□□ -0.33
SDF2-202ENST00000585428 PPP3CBP16298 524 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 TIA1P31483 386 aaKnown RBP eCLIP12.98□□□□□ -0.33
SDF2-202ENST00000585428 SLC6A8P48029 635 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 HTR6P50406 440 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 C17orf67Q0P5P2 114 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 C2orf80Q0P641 193 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 DECR1Q16698 335 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 TEX35Q5T0J7 233 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 SYT10Q6XYQ8 523 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 STAC2Q6ZMT1 411 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 TIFABQ6ZNK6 161 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 GPRIN3Q6ZVF9 776 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 GGNQ86UU5 652 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 SPATA3Q8NHX4 192 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 ELP4Q96EB1 424 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 BBS4Q96RK4 519 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 TSPYL1Q9H0U9 437 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 GLIPR2Q9H4G4 154 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 GRID1Q9ULK0 1009 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 NFU1Q9UMS0 254 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 TIMM22Q9Y584 194 aa12.98□□□□□ -0.33
SDF2-202ENST00000585428 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.97□□□□□ -0.33
SDF2-202ENST00000585428 POC1B-GALNT4F8VUJ3 575 aa12.97□□□□□ -0.33
SDF2-202ENST00000585428 TMCC2O75069 709 aa12.97□□□□□ -0.33
SDF2-202ENST00000585428 PLAUP00749 431 aa12.97□□□□□ -0.33
SDF2-202ENST00000585428 JUNP05412 331 aaKnown RBP12.97□□□□□ -0.33
SDF2-202ENST00000585428 SNRPAP09012 282 aaKnown RBP12.97□□□□□ -0.33
SDF2-202ENST00000585428 TAC1P20366 129 aa12.97□□□□□ -0.33
SDF2-202ENST00000585428 CLK3P49761 638 aaKnown RBP12.97□□□□□ -0.33
SDF2-202ENST00000585428 NCBP2P52298 156 aaKnown RBP eCLIP12.97□□□□□ -0.33
SDF2-202ENST00000585428 PRKAA2P54646 552 aa12.97□□□□□ -0.33
SDF2-202ENST00000585428 RPS3AP61247 264 aaKnown RBP12.97□□□□□ -0.33
SDF2-202ENST00000585428 PRR5P85299 388 aa12.97□□□□□ -0.33
SDF2-202ENST00000585428 BTKQ06187 659 aa12.97□□□□□ -0.33
SDF2-202ENST00000585428 SGCBQ16585 318 aa12.97□□□□□ -0.33
SDF2-202ENST00000585428 BEX5Q5H9J7 111 aa12.97□□□□□ -0.33
SDF2-202ENST00000585428 SH2D4BQ5SQS7 431 aa12.97□□□□□ -0.33
SDF2-202ENST00000585428 FAM71E1Q6IPT2 247 aa12.97□□□□□ -0.33
SDF2-202ENST00000585428 HOXB13Q92826 284 aaPredicted RBP12.97□□□□□ -0.33
SDF2-202ENST00000585428 GFM2Q969S9 779 aaKnown RBP12.97□□□□□ -0.33
SDF2-202ENST00000585428 GMPPAQ96IJ6 420 aaPredicted RBP12.97□□□□□ -0.33
SDF2-202ENST00000585428 TMEM237Q96Q45 408 aa12.97□□□□□ -0.33
SDF2-202ENST00000585428 TMEM204Q9BSN7 226 aa12.97□□□□□ -0.33
SDF2-202ENST00000585428 LMF2Q9BU23 707 aaKnown RBP12.97□□□□□ -0.33
SDF2-202ENST00000585428 SENP1Q9P0U3 644 aa12.97□□□□□ -0.33
SDF2-202ENST00000585428 MRTO4Q9UKD2 239 aaKnown RBP12.97□□□□□ -0.33
SDF2-202ENST00000585428 WBP11Q9Y2W2 641 aaKnown RBP12.97□□□□□ -0.33
SDF2-202ENST00000585428 FBN3Q75N90 2809 aa12.97□□□□□ -0.33
SDF2-202ENST00000585428 ADAMDEC1O15204 470 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 SOX30O94993 753 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 UTS2O95399 124 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 ANGPTL1O95841 491 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 IGKV1D-16P01601 117 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 ENO1P06733 434 aaKnown RBP12.96□□□□□ -0.33
SDF2-202ENST00000585428 FCGR2AP12318 317 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 ATP5F1P24539 256 aaPredicted RBP12.96□□□□□ -0.33
SDF2-202ENST00000585428 HMOX2P30519 316 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms