RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 MLIPQ5VWP3 458 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 RHBDD2Q6NTF9 364 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 TCTN3Q6NUS6 607 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 PCSK4Q6UW60 755 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 TSPYL5Q86VY4 417 aaPredicted RBP9.66□□□□□ -0.86
LIG3-203ENST00000585370 HS3ST5Q8IZT8 346 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 ZNF619Q8N2I2 560 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 COX18Q8N8Q8 333 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 OR10G2Q8NGC3 310 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 OR52R1Q8NGF1 315 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 IFI44Q8TCB0 444 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 GPR151Q8TDV0 419 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 CDS1Q92903 461 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 ART5Q96L15 291 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 ALPK1Q96QP1 1244 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 ARHGDIGQ99819 225 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 APOL4Q9BPW4 351 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 NUDT22Q9BRQ3 303 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 FNDC11Q9BVV2 318 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 FAM192AQ9GZU8 254 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 ZNF350Q9GZX5 532 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 ANKRD19PQ9H560 264 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 LANCL2Q9NS86 450 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 TMEM9Q9P0T7 183 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 RARRES3Q9UL19 164 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 MGAT4BQ9UQ53 548 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 KIF26BQ2KJY2 2108 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 A0A087WXM4 84 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 A0A1W2PNU3 283 aaPredicted RBP9.65□□□□□ -0.86
LIG3-203ENST00000585370 A0A1W2PQM1 296 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 A0A1W2PRQ8 180 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 TRIM64A6NGJ6 449 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 AGAP5A6NIR3 686 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 SMNDC1O75940 238 aaKnown RBP eCLIP9.65□□□□□ -0.86
LIG3-203ENST00000585370 DXOO77932 396 aaKnown RBP9.65□□□□□ -0.86
LIG3-203ENST00000585370 ONECUT2O95948 504 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 RECKO95980 971 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 CLPTM1O96005 669 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 IFNA16P05015 189 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 CYC1P08574 325 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 CT62P0C5K7 136 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 TNNI3P19429 210 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 GABRA3P34903 492 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 TRHRP34981 398 aaPredicted RBP9.65□□□□□ -0.86
LIG3-203ENST00000585370 PTGER1P34995 402 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 IFNGR2P38484 337 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 RPL5P46777 297 aaKnown RBP9.65□□□□□ -0.86
LIG3-203ENST00000585370 PDX1P52945 283 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 NR1H2P55055 460 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 CXADRP78310 365 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 PSPHP78330 225 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 GABREP78334 506 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 BTG2P78543 158 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 MAT1AQ00266 395 aaKnown RBP9.65□□□□□ -0.86
LIG3-203ENST00000585370 C19orf57Q0VDD7 668 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 PPP1R8Q12972 351 aaKnown RBP9.65□□□□□ -0.86
LIG3-203ENST00000585370 NPRL3Q12980 569 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 DGCR6Q14129 220 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 ZNF267Q14586 743 aaPredicted RBP9.65□□□□□ -0.86
LIG3-203ENST00000585370 EXOC3L2Q2M3D2 409 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 LIN52Q52LA3 116 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 PERM1Q5SV97 790 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 DCST2Q5T1A1 773 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 TYW3Q6IPR3 259 aaKnown RBP9.65□□□□□ -0.86
LIG3-203ENST00000585370 ZNF574Q6ZN55 896 aaPredicted RBP9.65□□□□□ -0.86
LIG3-203ENST00000585370 FRRS1Q6ZNA5 592 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 PARP8Q8N3A8 854 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 LSM14AQ8ND56 463 aaKnown RBP9.65□□□□□ -0.86
LIG3-203ENST00000585370 ZNF248Q8NDW4 579 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 PLPP5Q8NEB5 264 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 TSPAN14Q8NG11 270 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 HDAC2Q92769 488 aaKnown RBP9.65□□□□□ -0.86
LIG3-203ENST00000585370 SLC35B4Q969S0 331 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 PRRC1Q96M27 445 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 PTCHD1Q96NR3 888 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 MUS81Q96NY9 551 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 DEPDC7Q96QD5 511 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 GFM1Q96RP9 751 aaKnown RBP9.65□□□□□ -0.86
LIG3-203ENST00000585370 MBOAT4Q96T53 435 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 FEVQ99581 238 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 G6PC3Q9BUM1 346 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 YIPF2Q9BWQ6 316 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 GABARAPL3Q9BY60 117 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 GRIP2Q9C0E4 1043 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 SLC7A5P2Q9GIP4 190 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 TGIF2Q9GZN2 237 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 ING2Q9H160 280 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 ANKRA2Q9H9E1 313 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 NMNAT1Q9HAN9 279 aaPredicted RBP9.65□□□□□ -0.86
LIG3-203ENST00000585370 FOLH1BQ9HBA9 442 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 ASCL3Q9NQ33 180 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 PAPOLBQ9NRJ5 636 aaKnown RBP9.65□□□□□ -0.86
LIG3-203ENST00000585370 BLOC1S6Q9UL45 172 aa9.65□□□□□ -0.86
LIG3-203ENST00000585370 HEMK1Q9Y5R4 338 aaPredicted RBP9.65□□□□□ -0.86
LIG3-203ENST00000585370 BSNQ9UPA5 3926 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 IGKV3D-11A0A0A0MRZ8 115 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 IGHV5-10-1A0A0J9YXX1 117 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 TEX51A0A1B0GUA7 166 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 AP3D1O14617 1153 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 BCKDKO14874 412 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms