RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 TTI1O43156 1089 aa2.54□□□□□ -2
COPS3-217ENST00000583160 HTATSF1O43719 755 aaKnown RBP2.54□□□□□ -2
COPS3-217ENST00000583160 LCMT2O60294 686 aaKnown RBP2.54□□□□□ -2
COPS3-217ENST00000583160 CYP3A5P20815 502 aa2.54□□□□□ -2
COPS3-217ENST00000583160 STIP1P31948 543 aaKnown RBP2.54□□□□□ -2
COPS3-217ENST00000583160 RFC4P35249 363 aa2.54□□□□□ -2
COPS3-217ENST00000583160 SAA4P35542 130 aa2.54□□□□□ -2
COPS3-217ENST00000583160 ZNF131P52739 623 aa2.54□□□□□ -2
COPS3-217ENST00000583160 ST8SIA6P61647 398 aa2.54□□□□□ -2
COPS3-217ENST00000583160 RPS8P62241 208 aaKnown RBP2.54□□□□□ -2
COPS3-217ENST00000583160 TSPY1Q01534 308 aa2.54□□□□□ -2
COPS3-217ENST00000583160 MSLNQ13421 630 aaPredicted RBP2.54□□□□□ -2
COPS3-217ENST00000583160 KLF5Q13887 457 aaPredicted RBP2.54□□□□□ -2
COPS3-217ENST00000583160 KRT31Q15323 416 aa2.54□□□□□ -2
COPS3-217ENST00000583160 STX1AQ16623 288 aa2.54□□□□□ -2
COPS3-217ENST00000583160 TCHHL1Q5QJ38 904 aaPredicted RBP2.54□□□□□ -2
COPS3-217ENST00000583160 ERICH1Q86X53 443 aa2.54□□□□□ -2
COPS3-217ENST00000583160 MKXQ8IYA7 352 aa2.54□□□□□ -2
COPS3-217ENST00000583160 NFAM1Q8NET5 270 aaPredicted RBP2.54□□□□□ -2
COPS3-217ENST00000583160 RFESDQ8TAC1 157 aa2.54□□□□□ -2
COPS3-217ENST00000583160 UTP14AQ9BVJ6 771 aaKnown RBP2.54□□□□□ -2
COPS3-217ENST00000583160 TEX13AQ9BXU3 409 aaPredicted RBP2.54□□□□□ -2
COPS3-217ENST00000583160 NAPBQ9H115 298 aa2.54□□□□□ -2
COPS3-217ENST00000583160 CENPMQ9NSP4 180 aa2.54□□□□□ -2
COPS3-217ENST00000583160 DDX28Q9NUL7 540 aaKnown RBP2.54□□□□□ -2
COPS3-217ENST00000583160 DNAJB9Q9UBS3 223 aa2.54□□□□□ -2
COPS3-217ENST00000583160 DIMT1Q9UNQ2 313 aaKnown RBP2.54□□□□□ -2
COPS3-217ENST00000583160 SLC9A8Q9Y2E8 581 aa2.54□□□□□ -2
COPS3-217ENST00000583160 SLX4Q8IY92 1834 aa2.54□□□□□ -2
COPS3-217ENST00000583160 TIAM2Q8IVF5 1701 aa2.54□□□□□ -2
COPS3-217ENST00000583160 C13orf42A0A1B0GVH6 325 aa2.53□□□□□ -2
COPS3-217ENST00000583160 HMGB1P1B2RPK0 211 aaPredicted RBP2.53□□□□□ -2
COPS3-217ENST00000583160 PDE5AO76074 875 aa2.53□□□□□ -2
COPS3-217ENST00000583160 CCDC166P0CW27 439 aa2.53□□□□□ -2
COPS3-217ENST00000583160 ZP3P21754 424 aa2.53□□□□□ -2
COPS3-217ENST00000583160 IGFBP5P24593 272 aa2.53□□□□□ -2
COPS3-217ENST00000583160 SERPINB6P35237 376 aa2.53□□□□□ -2
COPS3-217ENST00000583160 OR1D4P47884 311 aa2.53□□□□□ -2
COPS3-217ENST00000583160 ALDH3B2P48448 385 aa2.53□□□□□ -2
COPS3-217ENST00000583160 KYAT1Q16773 422 aa2.53□□□□□ -2
COPS3-217ENST00000583160 GLYR1Q49A26 553 aaPredicted RBP2.53□□□□□ -2
COPS3-217ENST00000583160 ANKRD20A4Q4UJ75 823 aa2.53□□□□□ -2
COPS3-217ENST00000583160 ANKRD20A8PQ5CZ79 823 aa2.53□□□□□ -2
COPS3-217ENST00000583160 ANKRD20A2Q5SQ80 823 aa2.53□□□□□ -2
COPS3-217ENST00000583160 ANKRD20A1Q5TYW2 823 aa2.53□□□□□ -2
COPS3-217ENST00000583160 ANKRD20A3Q5VUR7 823 aa2.53□□□□□ -2
COPS3-217ENST00000583160 GBP6Q6ZN66 633 aa2.53□□□□□ -2
COPS3-217ENST00000583160 ERI1Q8IV48 349 aaKnown RBP2.53□□□□□ -2
COPS3-217ENST00000583160 RDH11Q8TC12 318 aa2.53□□□□□ -2
COPS3-217ENST00000583160 SNRNP27Q8WVK2 155 aaKnown RBP2.53□□□□□ -2
COPS3-217ENST00000583160 GLYATL1Q969I3 302 aa2.53□□□□□ -2
COPS3-217ENST00000583160 TEKT1Q969V4 418 aa2.53□□□□□ -2
COPS3-217ENST00000583160 FAM46BQ96A09 425 aa2.53□□□□□ -2
COPS3-217ENST00000583160 ZNF350Q9GZX5 532 aa2.53□□□□□ -2
COPS3-217ENST00000583160 NRN1Q9NPD7 142 aa2.53□□□□□ -2
COPS3-217ENST00000583160 DNAJC17Q9NVM6 304 aaKnown RBP2.53□□□□□ -2
COPS3-217ENST00000583160 FLVCR1Q9Y5Y0 555 aa2.53□□□□□ -2
COPS3-217ENST00000583160 NUP98P52948 1817 aa2.53□□□□□ -2
COPS3-217ENST00000583160 THSD7BQ9C0I4 1608 aa2.53□□□□□ -2
COPS3-217ENST00000583160 DLG5Q8TDM6 1919 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 CACNA1SQ13698 1873 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 TRPM7Q96QT4 1865 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 IBTKQ9P2D0 1353 aaPredicted RBP2.52□□□□□ -2.01
COPS3-217ENST00000583160 LAMB4A4D0S4 1761 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 ANKRD36CQ5JPF3 1778 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 KDM3BQ7LBC6 1761 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 TRIM49D1C9J1S8 452 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 SH2D1BO14796 132 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 HSPA5P11021 654 aaKnown RBP2.52□□□□□ -2.01
COPS3-217ENST00000583160 RBP5P82980 135 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 SHROOM1Q2M3G4 852 aaPredicted RBP2.52□□□□□ -2.01
COPS3-217ENST00000583160 HKDC1Q2TB90 917 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 ZNF789Q5FWF6 425 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 SMIM5Q71RC9 77 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 VSIG1Q86XK7 387 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 CLYBLQ8N0X4 340 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 CADM2Q8N3J6 435 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 SLC25A38Q96DW6 304 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 MRPL53Q96EL3 112 aaKnown RBP2.52□□□□□ -2.01
COPS3-217ENST00000583160 EPSTI1Q96J88 318 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 CPXM1Q96SM3 734 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 FUNDC2Q9BWH2 189 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 HCAR1Q9BXC0 346 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 GANQ9H2C0 597 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 NEU3Q9UQ49 428 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 KNSTRNQ9Y448 316 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 RLFQ13129 1914 aa2.52□□□□□ -2.01
COPS3-217ENST00000583160 CARMIL3Q8ND23 1372 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 NPIPA5A0A0B4J1W7 369 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 ERVV-1B6SEH8 477 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 NPIPA5E9PKD4 350 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 REC8O95072 547 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 IGHV3-23P01764 117 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 OR3A4PP47883 348 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 HAND2P61296 217 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 ZNF85Q03923 595 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 ZIC1Q15915 447 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 IL17AQ16552 155 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 MEP1BQ16820 701 aa2.51□□□□□ -2.01
COPS3-217ENST00000583160 KBTBD12Q3ZCT8 623 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms