RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CTNSO60931 367 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 SOX14O95416 240 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 MMP11P24347 488 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 EMP3P54852 163 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 ENTPD8Q5MY95 495 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 ZNF836Q6ZNA1 936 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 GALNT12Q8IXK2 581 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 CAPN10Q9HC96 672 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 PRTFDC1Q9NRG1 225 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 HCN3Q9P1Z3 774 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 A0A1B0GTQ1 180 aa21.08■□□□□ 0.97
CCDC47-204ENST00000582252 FOXS1O43638 330 aa21.08■□□□□ 0.97
CCDC47-204ENST00000582252 KIAA0513O60268 411 aa21.08■□□□□ 0.97
CCDC47-204ENST00000582252 RPS4Y1P22090 263 aaKnown RBP21.08■□□□□ 0.97
CCDC47-204ENST00000582252 ACVR2AP27037 513 aa21.08■□□□□ 0.97
CCDC47-204ENST00000582252 EPHA8P29322 1005 aaPredicted RBP21.08■□□□□ 0.97
CCDC47-204ENST00000582252 GPR68Q15743 365 aa21.08■□□□□ 0.97
CCDC47-204ENST00000582252 SLC23A3Q6PIS1 610 aa21.08■□□□□ 0.97
CCDC47-204ENST00000582252 ZNF730Q6ZMV8 503 aa21.08■□□□□ 0.97
CCDC47-204ENST00000582252 ZER1Q7Z7L7 766 aa21.08■□□□□ 0.97
CCDC47-204ENST00000582252 SIMC1Q8NDZ2 872 aa21.08■□□□□ 0.97
CCDC47-204ENST00000582252 OR8J1Q8NGP2 316 aa21.08■□□□□ 0.97
CCDC47-204ENST00000582252 PIGXQ8TBF5 258 aa21.08■□□□□ 0.97
CCDC47-204ENST00000582252 RBM18Q96H35 190 aaKnown RBP21.08■□□□□ 0.97
CCDC47-204ENST00000582252 CRELD1Q96HD1 420 aa21.08■□□□□ 0.97
CCDC47-204ENST00000582252 ZNF578Q96N58 590 aaPredicted RBP21.08■□□□□ 0.97
CCDC47-204ENST00000582252 CTPS2Q9NRF8 586 aa21.08■□□□□ 0.97
CCDC47-204ENST00000582252 SLC6A14Q9UN76 642 aa21.08■□□□□ 0.97
CCDC47-204ENST00000582252 GPR55Q9Y2T6 319 aaPredicted RBP21.08■□□□□ 0.97
CCDC47-204ENST00000582252 NKX2-2O95096 273 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 GABARAPO95166 117 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 CT62P0C5K7 136 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 PIPP12273 146 aaPredicted RBP21.07■□□□□ 0.96
CCDC47-204ENST00000582252 MAP3K8P41279 467 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 GABRA4P48169 554 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 NUDT6P53370 316 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 EEF1A1P68104 462 aaKnown RBP21.07■□□□□ 0.96
CCDC47-204ENST00000582252 BNIP3Q12983 259 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 BIKQ13323 160 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 GRM7Q14831 915 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 EXOSC7Q15024 291 aaKnown RBP21.07■□□□□ 0.96
CCDC47-204ENST00000582252 SHBQ15464 509 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 DECR1Q16698 335 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 TMEM201Q5SNT2 666 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 ZC3H14Q6PJT7 736 aaKnown RBP21.07■□□□□ 0.96
CCDC47-204ENST00000582252 P2RY8Q86VZ1 359 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 NLGN4XQ8N0W4 816 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 CLIP4Q8N3C7 705 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 OR52R1Q8NGF1 315 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 ACOT11Q8WXI4 607 aaPredicted RBP21.07■□□□□ 0.96
CCDC47-204ENST00000582252 HOXB13Q92826 284 aaPredicted RBP21.07■□□□□ 0.96
CCDC47-204ENST00000582252 YIPF6Q96EC8 236 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 PEX11GQ96HA9 241 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 PELOQ9BRX2 385 aaKnown RBP21.07■□□□□ 0.96
CCDC47-204ENST00000582252 ITPAQ9BY32 194 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 PRRG3Q9BZD7 231 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 SEMA4GQ9NTN9 838 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 CHST2Q9Y4C5 530 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 A0A087WUU8 490 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 H0YIG0 161 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 SLC22A1O15245 554 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 CTSBP07858 339 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 GUSBP08236 651 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 NID1P14543 1247 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 GABRA3P34903 492 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 GFERP55789 205 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 IGLV3-21P80748 117 aaPredicted RBP21.07■□□□□ 0.96
CCDC47-204ENST00000582252 HLA-BQ31612 363 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 TRIM61Q5EBN2 209 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 SLC16A12Q6ZSM3 486 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 SLC25A45Q8N413 288 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 RIT1Q92963 219 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 SLC41A3Q96GZ6 507 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 DGAT2Q96PD7 388 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 NECTIN3Q9NQS3 549 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 LRIT1Q9P2V4 623 aa21.07■□□□□ 0.96
CCDC47-204ENST00000582252 GPR179Q6PRD1 2367 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 MYO15AQ9UKN7 3530 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 FITM1A5D6W6 292 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 FRS3O43559 492 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 CBX7O95931 251 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 TNNI3P19429 210 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 SMSP52788 366 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 TSPAN31Q12999 210 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 NR1D2Q14995 579 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 LPAL2Q16609 132 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 CCNJQ5T5M9 372 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 B3GNT7Q8NFL0 401 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 TEX47Q8TBZ9 253 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 PIK3R3Q92569 461 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 MMABQ96EY8 250 aaPredicted RBP21.06■□□□□ 0.96
CCDC47-204ENST00000582252 LMF2Q9BU23 707 aaKnown RBP21.06■□□□□ 0.96
CCDC47-204ENST00000582252 AMBNQ9NP70 447 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 GPR83Q9NYM4 423 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 PCDHGA5Q9Y5G8 931 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 RNF215Q9Y6U7 377 aa21.06■□□□□ 0.96
CCDC47-204ENST00000582252 IGHV5-51A0A0C4DH38 117 aa21.05■□□□□ 0.96
CCDC47-204ENST00000582252 NUDT21O43809 227 aaKnown RBP21.05■□□□□ 0.96
CCDC47-204ENST00000582252 CNOT3O75175 753 aaKnown RBP21.05■□□□□ 0.96
CCDC47-204ENST00000582252 CER1O95813 267 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms