RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 ZCCHC12Q6PEW1 402 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 ENPP6Q6UWR7 440 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 MEX3BQ6ZN04 569 aaKnown RBP17.72■□□□□ 0.43
SREBF1-220ENST00000581707 IFNEQ86WN2 208 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 LACC1Q8IV20 430 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 LIX1LQ8IVB5 337 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 TRIM42Q8IWZ5 723 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 RIMKLAQ8IXN7 391 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 KIRREL3Q8IZU9 778 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 NATD1Q8N6N6 113 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 ANKRD42Q8N9B4 389 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 NUDT8Q8WV74 236 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 OR5P2Q8WZ92 322 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 COQ8BQ96D53 544 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 SORT1Q99523 831 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 TRIM8Q9BZR9 551 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 AKTIPQ9H8T0 292 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 NPDC1Q9NQX5 325 aaPredicted RBP17.72■□□□□ 0.43
SREBF1-220ENST00000581707 SIRT3Q9NTG7 399 aaPredicted RBP17.72■□□□□ 0.43
SREBF1-220ENST00000581707 NOP53Q9NZM5 478 aaKnown RBP17.72■□□□□ 0.43
SREBF1-220ENST00000581707 DKKL1Q9UK85 242 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 HSPB2A8KAH6 182 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 KDM4EB2RXH2 506 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-220ENST00000581707 B4DXG7 233 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 ZIC3O60481 467 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 UTS2O95399 124 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 IGKV1D-16P01601 117 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 ACP2P11117 423 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 CPN1P15169 458 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 TIMP3P35625 211 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 GFRA1P56159 465 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 HSPB2Q16082 182 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 LSM12Q3MHD2 195 aaKnown RBP17.71■□□□□ 0.43
SREBF1-220ENST00000581707 BEND6Q5SZJ8 279 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-220ENST00000581707 NSUN5P2Q63ZY6 315 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 MFSD12Q6NUT3 480 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 AAGABQ6PD74 315 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 ZNF295-AS1Q8N0V1 137 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 FADS6Q8N9I5 356 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 SLC16A11Q8NCK7 471 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 FAM120BQ96EK7 910 aaKnown RBP17.71■□□□□ 0.43
SREBF1-220ENST00000581707 C16orf58Q96GQ5 468 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 TRIB1Q96RU8 372 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 DSN1Q9H410 356 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 ZCCHC3Q9NUD5 404 aaKnown RBP17.71■□□□□ 0.43
SREBF1-220ENST00000581707 ASIC5Q9NY37 505 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 HAO1Q9UJM8 370 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 SNX8Q9Y5X2 465 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 TACC2O95359 2948 aa17.71■□□□□ 0.43
SREBF1-220ENST00000581707 PCNX3Q9H6A9 2034 aa17.71■□□□□ 0.42
SREBF1-220ENST00000581707 FBN2P35556 2912 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 TMEM120BA0PK00 339 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 CD8B2A6NJW9 211 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 ALOX5P09917 674 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 MSX1P28360 303 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 CEACAM8P31997 349 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-220ENST00000581707 PRIM2P49643 509 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 DIO3P55073 304 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 DSCR4P56555 118 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-220ENST00000581707 WNT3P56703 355 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 CLDN8P56748 225 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 BST1Q10588 318 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 STX5Q13190 355 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 RCAN2Q14206 197 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 DUSP5Q16690 384 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 SLC25A35Q3KQZ1 300 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 MARCH3Q86UD3 253 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 TNIP2Q8NFZ5 429 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 OR2M3Q8NG83 312 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 FBXO30Q8TB52 745 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 ZPLD1Q8TCW7 415 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 DUSP19Q8WTR2 217 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 SFXN2Q96NB2 322 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 TREX2Q9BQ50 279 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-220ENST00000581707 YIPF4Q9BSR8 244 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 TBL1XR1Q9BZK7 514 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 RTN4RQ9BZR6 473 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 BHLHE41Q9C0J9 482 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-220ENST00000581707 CALHM2Q9HA72 323 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 MED11Q9P086 117 aa17.7■□□□□ 0.42
SREBF1-220ENST00000581707 KCNK2O95069 426 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 C6orf47O95873 294 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 IL2RAP01589 272 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 HMGN2P05204 90 aaKnown RBP17.69■□□□□ 0.42
SREBF1-220ENST00000581707 IGFBP2P18065 325 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 TCEA1P23193 301 aaKnown RBP17.69■□□□□ 0.42
SREBF1-220ENST00000581707 CHMP24386 653 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 CCT3P49368 545 aaKnown RBP17.69■□□□□ 0.42
SREBF1-220ENST00000581707 WDR4P57081 412 aaKnown RBP17.69■□□□□ 0.42
SREBF1-220ENST00000581707 C21orf58P58505 322 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 SRYQ05066 204 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 PGS1Q32NB8 556 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 GRAMD1BQ3KR37 738 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 FIGNL1Q6PIW4 674 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 GALNT10Q86SR1 603 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 PSMA8Q8TAA3 256 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 FAM110BQ8TC76 370 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 JADE3Q92613 823 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 DUSP26Q9BV47 211 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 PNPOQ9NVS9 261 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms