RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 ELAVL1Q15717 326 aaKnown RBP17.67■□□□□ 0.42
LIMD2-209ENST00000580222 RTL4Q6ZR62 310 aa17.67■□□□□ 0.42
LIMD2-209ENST00000580222 RIMKLAQ8IXN7 391 aa17.67■□□□□ 0.42
LIMD2-209ENST00000580222 ST13P4Q8IZP2 240 aaPredicted RBP17.67■□□□□ 0.42
LIMD2-209ENST00000580222 LRRC25Q8N386 305 aaPredicted RBP17.67■□□□□ 0.42
LIMD2-209ENST00000580222 OR7A2PQ8NGA2 310 aa17.67■□□□□ 0.42
LIMD2-209ENST00000580222 CNRIP1Q96F85 164 aaPredicted RBP17.67■□□□□ 0.42
LIMD2-209ENST00000580222 YIPF4Q9BSR8 244 aa17.67■□□□□ 0.42
LIMD2-209ENST00000580222 ATAD3AQ9NVI7 634 aa17.67■□□□□ 0.42
LIMD2-209ENST00000580222 ZIM2Q9NZV7 527 aa17.67■□□□□ 0.42
LIMD2-209ENST00000580222 DYRK3O43781 588 aa17.66■□□□□ 0.42
LIMD2-209ENST00000580222 SNX3O60493 162 aa17.66■□□□□ 0.42
LIMD2-209ENST00000580222 SLC35E2P0CK97 266 aa17.66■□□□□ 0.42
LIMD2-209ENST00000580222 NT5EP21589 574 aa17.66■□□□□ 0.42
LIMD2-209ENST00000580222 TRPC1P48995 793 aa17.66■□□□□ 0.42
LIMD2-209ENST00000580222 PRSS53Q2L4Q9 553 aa17.66■□□□□ 0.42
LIMD2-209ENST00000580222 DPY19L1Q2PZI1 675 aa17.66■□□□□ 0.42
LIMD2-209ENST00000580222 PGS1Q32NB8 556 aa17.66■□□□□ 0.42
LIMD2-209ENST00000580222 ACSF3Q4G176 576 aaPredicted RBP17.66■□□□□ 0.42
LIMD2-209ENST00000580222 CPTPQ5TA50 214 aa17.66■□□□□ 0.42
LIMD2-209ENST00000580222 METTL21CQ5VZV1 264 aa17.66■□□□□ 0.42
LIMD2-209ENST00000580222 PPWD1Q96BP3 646 aaKnown RBP17.66■□□□□ 0.42
LIMD2-209ENST00000580222 RBM18Q96H35 190 aaKnown RBP17.66■□□□□ 0.42
LIMD2-209ENST00000580222 SDR39U1Q9NRG7 319 aaPredicted RBP17.66■□□□□ 0.42
LIMD2-209ENST00000580222 TAS2R7Q9NYW3 318 aa17.66■□□□□ 0.42
LIMD2-209ENST00000580222 ZNF629Q9UEG4 869 aaPredicted RBP17.66■□□□□ 0.42
LIMD2-209ENST00000580222 FOXD3Q9UJU5 478 aaPredicted RBP17.66■□□□□ 0.42
LIMD2-209ENST00000580222 RNF212BA8MTL3 300 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 C9JVG2 144 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 CRLF1O75462 422 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 SLC22A3O75751 556 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 EPPINO95925 133 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 NCBP2P52298 156 aaKnown RBP eCLIP17.65■□□□□ 0.42
LIMD2-209ENST00000580222 DUSP2Q05923 314 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 YTHDF3Q7Z739 585 aaKnown RBP17.65■□□□□ 0.42
LIMD2-209ENST00000580222 CCDC116Q8IYX3 515 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 LRRC75A-AS1Q8N1F1 130 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 GLB1L3Q8NCI6 653 aaPredicted RBP17.65■□□□□ 0.42
LIMD2-209ENST00000580222 ZFP28Q8NHY6 868 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 DAZLQ92904 295 aaKnown RBP17.65■□□□□ 0.42
LIMD2-209ENST00000580222 CIDECQ96AQ7 238 aaPredicted RBP17.65■□□□□ 0.42
LIMD2-209ENST00000580222 TESCQ96BS2 214 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 TEX37Q96LM6 180 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 ZNF681Q96N22 645 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 BDH2Q9BUT1 245 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 DUSP26Q9BV47 211 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 BHLHE41Q9C0J9 482 aaPredicted RBP17.65■□□□□ 0.42
LIMD2-209ENST00000580222 PROK2Q9HC23 129 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 SACM1LQ9NTJ5 587 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 CLCA3PQ9Y6N3 262 aa17.65■□□□□ 0.42
LIMD2-209ENST00000580222 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.65■□□□□ 0.42
LIMD2-209ENST00000580222 ANK2Q01484 3957 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 LRRC3CA6NJW4 275 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 MYO1GB0I1T2 1018 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 C17orf105B2RV13 164 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 SMPD2O60906 423 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 LAMP1P11279 417 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 MPIP34949 423 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 MRPL19P49406 292 aaKnown RBP17.64■□□□□ 0.41
LIMD2-209ENST00000580222 KRTAP1-1Q07627 177 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 SPANXN4Q5MJ08 99 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 KIF18BQ86Y91 864 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 GALNT12Q8IXK2 581 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 FBXW8Q8N3Y1 598 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 NATD1Q8N6N6 113 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 OR9I1Q8NGQ6 314 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 OR14A16Q8NHC5 309 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 ZBED6CLQ96FA7 236 aaPredicted RBP17.64■□□□□ 0.41
LIMD2-209ENST00000580222 LRRC46Q96FV0 321 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 ART5Q96L15 291 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 CCT8L2Q96SF2 557 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 ZNF703Q9H7S9 590 aaPredicted RBP17.64■□□□□ 0.41
LIMD2-209ENST00000580222 JKAMPQ9P055 326 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 KIAA1549Q9HCM3 1950 aa17.64■□□□□ 0.41
LIMD2-209ENST00000580222 ARID1AO14497 2285 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 FAM107AO95990 144 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 ATP1B1P05026 303 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 GPX3P22352 226 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 IL12AP29459 219 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 S100A3P33764 101 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 GALNSP34059 522 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 TIMP3P35625 211 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 HSPB3Q12988 150 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 LTB4RQ15722 352 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 MPEG1Q2M385 716 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 SPRED3Q2MJR0 410 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 FAM174BQ3ZCQ3 159 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 OR4F3Q6IEY1 312 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 HSDL2Q6YN16 418 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 DGAT2L6Q6ZPD8 337 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 GOLM1Q8NBJ4 401 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 OR9A2Q8NGT5 310 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 NEIL3Q8TAT5 605 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 DOK4Q8TEW6 326 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 PTPMT1Q8WUK0 201 aaPredicted RBP17.63■□□□□ 0.41
LIMD2-209ENST00000580222 RIT1Q92963 219 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 COQ8BQ96D53 544 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 GLIPR2Q9H4G4 154 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 ZNF385DQ9H6B1 395 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 SH2D2AQ9NP31 389 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms