RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 RASSF6Q6ZTQ3 369 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 TTLL10Q6ZVT0 673 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 BPHLQ86WA6 291 aaPredicted RBP10.35□□□□□ -0.75
SKA2-204ENST00000578519 RBM45Q8IUH3 476 aaKnown RBP10.35□□□□□ -0.75
SKA2-204ENST00000578519 GRAMD2AQ8IUY3 354 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 LACC1Q8IV20 430 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 SLITRK4Q8IW52 837 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 FAM181AQ8N9Y4 354 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 ZNF527Q8NB42 609 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 TMEM52Q8NDY8 209 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 OR4D11Q8NGI4 311 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 OR4C6Q8NH72 309 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 DAZLQ92904 295 aaKnown RBP10.35□□□□□ -0.75
SKA2-204ENST00000578519 MUL1Q969V5 352 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 TMIGD2Q96BF3 282 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 ISOC1Q96CN7 298 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 PTCHD1Q96NR3 888 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 SLC46A1Q96NT5 459 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 FUZQ9BT04 418 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 TRIM2Q9C040 744 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 ZNF768Q9H5H4 540 aaKnown RBP10.35□□□□□ -0.75
SKA2-204ENST00000578519 MKKSQ9NPJ1 570 aaPredicted RBP10.35□□□□□ -0.75
SKA2-204ENST00000578519 TIMMDC1Q9NPL8 285 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 FTSJ1Q9UET6 329 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 MUTYHQ9UIF7 546 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 PSORS1C1Q9UIG5 152 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 PILRBQ9UKJ0 227 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 OR10H1Q9Y4A9 318 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 PCDHGA10Q9Y5H3 936 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 A0A1B0GX78 115 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 CPSF4LA6NMK7 179 aaKnown RBP10.34□□□□□ -0.75
SKA2-204ENST00000578519 ENO4A6NNW6 628 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 POLR1CO15160 346 aaPredicted RBP10.34□□□□□ -0.75
SKA2-204ENST00000578519 HRO43593 1189 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 XPNPEP2O43895 674 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 KCNK2O95069 426 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 HMGN1P05114 100 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 ANKRD34CP0C6C1 535 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 PIPP12273 146 aaPredicted RBP10.34□□□□□ -0.75
SKA2-204ENST00000578519 CCNA2P20248 432 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 DRD5P21918 477 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 RORAP35398 523 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 PEX19P40855 299 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 SEPHS1P49903 392 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 EXOSC7Q15024 291 aaKnown RBP10.34□□□□□ -0.75
SKA2-204ENST00000578519 OCLNQ16625 522 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 KLHL22Q53GT1 634 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 SNAP47Q5SQN1 464 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 MFSD4BQ5TF39 518 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 HLA-DQA1Q5Y7H0 255 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 ZNF836Q6ZNA1 936 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 MBOAT2Q6ZWT7 520 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 TMEM151BQ8IW70 566 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 SLC43A2Q8N370 569 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 CLDN22Q8N7P3 220 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 PIGKQ92643 395 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 DIO2Q92813 273 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 CCDC74AQ96AQ1 378 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 PLEKHA8Q96JA3 519 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 CCNL2Q96S94 520 aaPredicted RBP10.34□□□□□ -0.75
SKA2-204ENST00000578519 DOK1Q99704 481 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 CNPPD1Q9BV87 410 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 OR10A5Q9H207 317 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 ANKRA2Q9H9E1 313 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 SLC25A19Q9HC21 320 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 CHCHD3Q9NX63 227 aaKnown RBP10.34□□□□□ -0.75
SKA2-204ENST00000578519 ERVK-18Q9QC07 812 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 RPS6KB2Q9UBS0 482 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 REV1Q9UBZ9 1251 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 FBXO4Q9UKT5 387 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 SLC35A3Q9Y2D2 325 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 CLCA3PQ9Y6N3 262 aa10.34□□□□□ -0.75
SKA2-204ENST00000578519 MDC1Q14676 2089 aaKnown RBP10.34□□□□□ -0.75
SKA2-204ENST00000578519 TRANK1O15050 2925 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 A0A087WUU8 490 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 HCRTR1O43613 425 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 WBP4O75554 376 aaKnown RBP10.33□□□□□ -0.76
SKA2-204ENST00000578519 CDK1P06493 297 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 CT62P0C5K7 136 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 HPGDP15428 266 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 S1PR1P21453 382 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 MMP11P24347 488 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 FPR3P25089 353 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 GIPRP48546 466 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 GSSP48637 474 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 EMDP50402 254 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 PGDP52209 483 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 ATP12AP54707 1039 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 MAT1AQ00266 395 aaKnown RBP10.33□□□□□ -0.76
SKA2-204ENST00000578519 EMX1Q04741 257 aaPredicted RBP10.33□□□□□ -0.76
SKA2-204ENST00000578519 DMWDQ09019 674 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 FOXD4Q12950 439 aaPredicted RBP10.33□□□□□ -0.76
SKA2-204ENST00000578519 NCF4Q15080 339 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 SEC23BQ15437 767 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 ELAVL1Q15717 326 aaKnown RBP10.33□□□□□ -0.76
SKA2-204ENST00000578519 ZNF141Q15928 474 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 PLK5Q496M5 336 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 TMEM201Q5SNT2 666 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 SLC25A30Q5SVS4 291 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 MRPL2Q5T653 305 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms