RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	TMEM107	Q6UX40	140 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ZYG11A	Q6WRX3	759 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	STAC2	Q6ZMT1	411 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	DNM1P46	Q6ZS02	220 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	FRMD7	Q6ZUT3	714 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	LARP4	Q71RC2	724 aa	Known RBP eCLIP	3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PM20D2	Q8IYS1	436 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	LIX1	Q8N485	282 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	METTL25	Q8N6Q8	603 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SLC16A11	Q8NCK7	471 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	OR14L1P	Q8NHC6	308 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	METTL6	Q8TCB7	284 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	DUSP19	Q8WTR2	217 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	IFT81	Q8WYA0	676 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SMPDL3B	Q92485	455 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	NEUROG1	Q92886	237 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ERP27	Q96DN0	273 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	MTBP	Q96DY7	904 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	C1GALT1C1	Q96EU7	318 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	RMND5B	Q96G75	393 aa	Predicted RBP	3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	COX4I2	Q96KJ9	171 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	DACH2	Q96NX9	599 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	FMO2	Q99518	471 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SFXN3	Q9BWM7	321 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	GATA5	Q9BWX5	397 aa	Predicted RBP	3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SHCBP1L	Q9BZQ2	653 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ELOVL6	Q9H5J4	265 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	METTL7A	Q9H8H3	244 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	WDR41	Q9HAD4	459 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	MYNN	Q9NPC7	610 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	RYDEN	Q9NUL5	291 aa	Known RBP	3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	KLHL28	Q9NXS3	571 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	BAIAP2L1	Q9UHR4	511 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	POLR3H	Q9Y535	204 aa	Predicted RBP	3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	YLPM1	P49750	1951 aa	Known RBP	3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	RTTN	Q86VV8	2226 aa		3.99	□□□□□ -1.77
PPP4R1-209	ENST00000578329	HIVEP2	P31629	2446 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329		A0A087WUV0	522 aa	Predicted RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PRAMEF27	A3QJZ7	478 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	GOLGA6L10	A6NI86	522 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ZNF814	B7Z6K7	855 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ALG1L2	C9J202	215 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329		H0Y3Z8	333 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	MSTN	O14793	375 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	LSM1	O15116	133 aa	Known RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ADAMDEC1	O15204	470 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	EMC8	O43402	210 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	TBX19	O60806	448 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	DNAJA2	O60884	412 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SCN2B	O60939	215 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SMIM24	O75264	130 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ULK1	O75385	1050 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	TNFRSF21	O75509	655 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	URI1	O94763	535 aa	Predicted RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	UTS2	O95399	124 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	OXSR1	O95747	527 aa	Predicted RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	CD8A	P01732	235 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	INHBA	P08476	426 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ANXA4	P09525	319 aa	Predicted RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	INHBB	P09529	407 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	LINGO3	P0C6S8	592 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	CD8B	P10966	210 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PAX1	P15863	534 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	CD79B	P40259	229 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	TMED10	P49755	219 aa	Known RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	DGKQ	P52824	942 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PKNOX1	P55347	436 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	NRG3	P56975	720 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	DNAJB13	P59910	316 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SIRPA	P78324	504 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PHC1	P78364	1004 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	MRPS22	P82650	360 aa	Known RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PRR5	P85299	388 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SLC18A2	Q05940	514 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ZNF763	Q0D2J5	394 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	C2orf80	Q0P641	193 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	STX5	Q13190	355 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	GANAB	Q14697	944 aa	Known RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	TSC22D1	Q15714	1073 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	DUSP5	Q16690	384 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PLPPR5	Q32ZL2	321 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	NDUFAF6	Q330K2	333 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	XKR7	Q5GH72	579 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	CCNJ	Q5T5M9	372 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	HLA-DQA1	Q5Y7H0	255 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	TTC19	Q6DKK2	380 aa	Predicted RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	KLC3	Q6P597	504 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	CBLN3	Q6UW01	205 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PAGE2	Q7Z2X7	111 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	NUFIP2	Q7Z417	695 aa	Known RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	IFNE	Q86WN2	208 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	UBQLNL	Q8IYU4	475 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	GABRG1	Q8N1C3	465 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	GBP7	Q8N8V2	638 aa	Predicted RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	CLHC1	Q8NHS4	586 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	FBXO30	Q8TB52	745 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	RAB3IL1	Q8TBN0	382 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	EPS8L3	Q8TE67	593 aa	Known RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ZNF592	Q92610	1267 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ZNF75CP	Q92670	426 aa	Predicted RBP	3.98	□□□□□ -1.77

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