RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PCDHGB3Q9Y5G1 929 aa14.61□□□□□ -0.07
VAPA-204ENST00000577901 HSPB2A8KAH6 182 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 SYT5O00445 386 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 EMC8O43402 210 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 UGT2B11O75310 529 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 PSMG1O95456 288 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 DNASE1P24855 282 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 IL12BP29460 328 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 PEX19P40855 299 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 MASP1P48740 699 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 PRKAG1P54619 331 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 C21orf58P58505 322 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 PRR5P85299 388 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 PSG6Q00889 435 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 OCRLQ01968 901 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 SNTA1Q13424 505 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 EFR3AQ14156 821 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 HSPB2Q16082 182 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 CYP27C1Q4G0S4 372 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 SLC30A6Q6NXT4 461 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 SEM1Q6ZVN7 128 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 LARP4Q71RC2 724 aaKnown RBP eCLIP14.6□□□□□ -0.07
VAPA-204ENST00000577901 WDR75Q8IWA0 830 aaKnown RBP14.6□□□□□ -0.07
VAPA-204ENST00000577901 RIMKLAQ8IXN7 391 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 ULK2Q8IYT8 1036 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 KRTCAP2Q8N6L1 136 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 NUP43Q8NFH3 380 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 PIWIL2Q8TC59 973 aaKnown RBP14.6□□□□□ -0.07
VAPA-204ENST00000577901 LRRC8CQ8TDW0 803 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 DYDC1Q8WWB3 177 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 OR5P2Q8WZ92 322 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 HGDQ93099 445 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 SLC35A4Q96G79 324 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 ZNF597Q96LX8 424 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 RILPQ96NA2 401 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 ADOQ96SZ5 270 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 LMF2Q9BU23 707 aaKnown RBP14.6□□□□□ -0.07
VAPA-204ENST00000577901 DPY30Q9C005 99 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 BHLHE41Q9C0J9 482 aaPredicted RBP14.6□□□□□ -0.07
VAPA-204ENST00000577901 SLC6A15Q9H2J7 730 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 ACBD3Q9H3P7 528 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 ACKR4Q9NPB9 350 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 MARCOQ9UEW3 520 aaPredicted RBP14.6□□□□□ -0.07
VAPA-204ENST00000577901 EDARQ9UNE0 448 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 PLEKHA6Q9Y2H5 1048 aa14.6□□□□□ -0.07
VAPA-204ENST00000577901 HRNRQ86YZ3 2850 aaPredicted RBP14.59□□□□□ -0.07
VAPA-204ENST00000577901 LRRC3CA6NJW4 275 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 TRIM3O75382 744 aaPredicted RBP14.59□□□□□ -0.07
VAPA-204ENST00000577901 CDK9P50750 372 aaKnown RBP14.59□□□□□ -0.07
VAPA-204ENST00000577901 PNLIPRP2P54317 469 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 DIO3P55073 304 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 PGS1Q32NB8 556 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 VPS26BQ4G0F5 336 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 TMEM81Q6P7N7 255 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 ZCCHC12Q6PEW1 402 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 NPSR1Q6W5P4 371 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 SZRD1Q7Z422 152 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 SPATA19Q7Z5L4 167 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 CDRT4Q8N9R6 151 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 RELL2Q8NC24 303 aaPredicted RBP14.59□□□□□ -0.07
VAPA-204ENST00000577901 GOT1L1Q8NHS2 421 aaPredicted RBP14.59□□□□□ -0.07
VAPA-204ENST00000577901 NEIL3Q8TAT5 605 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 TMEM41AQ96HV5 264 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 DUSP26Q9BV47 211 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 QPCTLQ9NXS2 382 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 KLRF1Q9NZS2 232 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 NTMQ9P121 344 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 CBLCQ9ULV8 474 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 SNX8Q9Y5X2 465 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 DNHD1Q96M86 4753 aa14.59□□□□□ -0.07
VAPA-204ENST00000577901 DNAJC13O75165 2243 aa14.58□□□□□ -0.07
VAPA-204ENST00000577901 EML6Q6ZMW3 1958 aa14.58□□□□□ -0.07
VAPA-204ENST00000577901 A6NNC1 897 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 SDHDO14521 159 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 DVL2O14641 736 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 CFLARO15519 480 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 TSPAN2O60636 221 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 EFNA1P20827 205 aaPredicted RBP14.58□□□□□ -0.08
VAPA-204ENST00000577901 BMP5P22003 454 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 GABRA3P34903 492 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 TRPC1P48995 793 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 PRIM2P49643 509 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 ASCL1P50553 236 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 PSMD4P55036 377 aaKnown RBP14.58□□□□□ -0.08
VAPA-204ENST00000577901 FOXD4Q12950 439 aaPredicted RBP14.58□□□□□ -0.08
VAPA-204ENST00000577901 GAB1Q13480 694 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 DECR1Q16698 335 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 FLYWCH1Q4VC44 716 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 BICRALQ6AI39 1079 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 OGFOD2Q6N063 350 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 CAMKMTQ7Z624 323 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 CDC20BQ86Y33 519 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 OR4N2Q8NGD1 307 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 GPR151Q8TDV0 419 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 FAM222BQ8WU58 562 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 RNASE6Q93091 150 aaKnown RBP14.58□□□□□ -0.08
VAPA-204ENST00000577901 LRRC46Q96FV0 321 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 MS4A4EQ96PG1 132 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 NODALQ96S42 347 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 OSBPL11Q9BXB4 747 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms