RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 RBM7Q9Y580 266 aaKnown RBP9.79□□□□□ -0.84
PTPRM-205ENST00000577827 TOGARAM1Q9Y4F4 1720 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 PDE4DIPQ5VU43 2346 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 TRBV4-1A0A0J9YWV2 114 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 MEGF11A6BM72 1044 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 ANTXRLA6NF34 631 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 M0R036 132 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 GPR39O43194 453 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 CLEC3AO75596 197 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 CSTAP01040 98 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 PDGFAP04085 211 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 ALDOBP05062 364 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 INHAP05111 366 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 PRR35P0CG20 571 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 HTR3AP46098 478 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 CYCSP99999 105 aaKnown RBP9.79□□□□□ -0.84
PTPRM-205ENST00000577827 OR2G6Q5TZ20 316 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 FAM122CQ6P4D5 195 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 ENPP7Q6UWV6 458 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 BTN2A1Q7KYR7 527 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 MEPCEQ7L2J0 689 aaKnown RBP9.79□□□□□ -0.84
PTPRM-205ENST00000577827 OR6V1Q8N148 313 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 OR52E2Q8NGJ4 325 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 OR2L2Q8NH16 312 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 NEK7Q8TDX7 302 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 TBC1D20Q96BZ9 403 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 NIPSNAP1Q9BPW8 284 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 BTBD2Q9BX70 525 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 NTN4Q9HB63 628 aa9.79□□□□□ -0.84
PTPRM-205ENST00000577827 GPRIN2O60269 458 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 PEX14O75381 377 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 AHSA1O95433 338 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 PLATP00750 562 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 RAB40ALP0C0E4 278 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 TGM1P22735 817 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 MAT2AP31153 395 aaKnown RBP9.78□□□□□ -0.84
PTPRM-205ENST00000577827 PRSS3P35030 304 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 RPS19P39019 145 aaKnown RBP9.78□□□□□ -0.84
PTPRM-205ENST00000577827 LEXMQ3ZCV2 418 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 RNASE10Q5GAN6 216 aaKnown RBP9.78□□□□□ -0.84
PTPRM-205ENST00000577827 HENMT1Q5T8I9 393 aaKnown RBP9.78□□□□□ -0.84
PTPRM-205ENST00000577827 ZNF776Q68DI1 518 aaPredicted RBP9.78□□□□□ -0.84
PTPRM-205ENST00000577827 SLC9B2Q86UD5 537 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 C7orf57Q8NEG2 295 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 OR2T4Q8NH00 348 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 ZFAND1Q8TCF1 268 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 PHOSPHO1Q8TCT1 267 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 ZNF480Q8WV37 535 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 RAB40AQ8WXH6 277 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 KLK6Q92876 244 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 AIFM2Q9BRQ8 373 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 HOXD1Q9GZZ0 328 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 IGFLR1Q9H665 355 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 SLC25A37Q9NYZ2 338 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 DHDHQ9UQ10 334 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 TMEM129A0AVI4 362 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 ARPC1BO15143 372 aaKnown RBP9.78□□□□□ -0.84
PTPRM-205ENST00000577827 HMGN2P05204 90 aaKnown RBP9.78□□□□□ -0.84
PTPRM-205ENST00000577827 PRLHRP49683 370 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 TEAD2Q15562 447 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 MAPK14Q16539 360 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 WASH2PQ6VEQ5 465 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 ZNF417Q8TAU3 575 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 ELP4Q96EB1 424 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 FCRL1Q96LA6 429 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 TREX2Q9BQ50 279 aaPredicted RBP9.78□□□□□ -0.84
PTPRM-205ENST00000577827 MFFQ9GZY8 342 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 QPCTLQ9NXS2 382 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 MRPL15Q9P015 296 aaKnown RBP9.78□□□□□ -0.84
PTPRM-205ENST00000577827 FEZF1A0PJY2 475 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 FABP7O15540 132 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 GJB3O75712 270 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 SLC22A5O76082 557 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 UBL3O95164 117 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 CD3GP09693 182 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 PRKACAP17612 351 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 S100A2P29034 98 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 ADH7P40394 386 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 SELENBP1Q13228 472 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 RAB11BQ15907 218 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 CLLU1OSQ5K130 101 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 XAF1Q6GPH4 301 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 FAHD1Q6P587 224 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 HMGN2P46Q86SG4 172 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 HORMAD2Q8N7B1 307 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 NANOGP1Q8N7R0 232 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 POGLUT1Q8NBL1 392 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 OR52N1Q8NH53 320 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 TMEM239Q8WW34 195 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 CPNE2Q96FN4 548 aaPredicted RBP9.78□□□□□ -0.84
PTPRM-205ENST00000577827 TRMT2BQ96GJ1 504 aaKnown RBP9.78□□□□□ -0.84
PTPRM-205ENST00000577827 ZNF419Q96HQ0 510 aaPredicted RBP9.78□□□□□ -0.84
PTPRM-205ENST00000577827 ZNF582Q96NG8 517 aaPredicted RBP9.78□□□□□ -0.84
PTPRM-205ENST00000577827 NECAB3Q96P71 396 aaPredicted RBP9.78□□□□□ -0.84
PTPRM-205ENST00000577827 CXCL16Q9H2A7 254 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 SNX11Q9Y5W9 270 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 BORCS7-ASMTA0A0B4J1R7 106 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 A0A0U1RQS6 177 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 SCGNO76038 276 aa9.78□□□□□ -0.84
PTPRM-205ENST00000577827 FURINP09958 794 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms