RNA–Protein interactions for RNA: ENST00000576019.5

VPS53-219, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-219ENST00000576019 PCLOQ9Y6V0 5065 aa5.16□□□□□ -1.58
VPS53-219ENST00000576019 IGSF9BQ9UPX0 1349 aa5.16□□□□□ -1.58
VPS53-219ENST00000576019 PTPRDP23468 1912 aa5.15□□□□□ -1.58
VPS53-219ENST00000576019 ZCWPW2A0A1B0GU75 182 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 ATP6AP2A0A1C7CYW4 349 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 METTL21EPA6NDL7 271 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 SPECC1L-ADORA2AF8WAN1 911 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 K7ESM1 405 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 WRBO00258 174 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 NDUFB8O95169 186 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 TXNDC12O95881 172 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 AGTP01019 485 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 APOHP02749 345 aaPredicted RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 ANXA4P09525 319 aaPredicted RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 PNMTP11086 282 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 KRT3P12035 628 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 DARSP14868 501 aaKnown RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 ZNF44P15621 663 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 CD1EP15812 388 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 ITGA2P17301 1181 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 PSMC3P17980 439 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 TSPAN8P19075 237 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 LHCGRP22888 699 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 GNL1P36915 607 aaPredicted RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 ACADSBP45954 432 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 NPY2RP49146 381 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 FNTAP49354 379 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 CEBPDP49716 269 aaPredicted RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 PPT1P50897 306 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 CARD18P57730 90 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 B3GALT5-AS1P59052 145 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 EIF3EP60228 445 aaKnown RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 MRPS6P82932 125 aaKnown RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 MTX1Q13505 466 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 CEACAM7Q14002 265 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 WDR43Q15061 677 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS53-219ENST00000576019 PON2Q15165 354 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 EXOC3L2Q2M3D2 409 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 GPR33Q49SQ1 333 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 MPPE1Q53F39 396 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 FSCBQ5H9T9 825 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 SEL1L3Q68CR1 1132 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 ZNF776Q68DI1 518 aaPredicted RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 KDM7AQ6ZMT4 941 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 C16orf62Q7Z3J2 963 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 RALGPS2Q86X27 583 aaPredicted RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 CCDC60Q8IWA6 550 aaPredicted RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 GPALPP1Q8IXQ4 340 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 RNF113BQ8IZP6 322 aaKnown RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 ANKFN1Q8N957 763 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 CCDC197Q8NCU1 140 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 C17orf47Q8NEP4 570 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 OR5D13Q8NGL4 314 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 P3H4Q92791 437 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 EMG1Q92979 244 aaKnown RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 NPY6RQ99463 290 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 S1PR3Q99500 378 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 WRAP53Q9BUR4 548 aaKnown RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 NUP58Q9BVL2 599 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 SPRTNQ9H040 489 aaPredicted RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 PNNQ9H307 717 aaKnown RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 EHD1Q9H4M9 534 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 ZCCHC4Q9H5U6 513 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 PELI2Q9HAT8 420 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 ELOVL3Q9HB03 270 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 UTP6Q9NYH9 597 aaKnown RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 IL36RNQ9UBH0 155 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 KCNS2Q9ULS6 477 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 LRP12Q9Y561 859 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.15□□□□□ -1.59
VPS53-219ENST00000576019 SLCO1B1Q9Y6L6 691 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 PLXND1Q9Y4D7 1925 aa5.15□□□□□ -1.59
VPS53-219ENST00000576019 A0A0G2JNG1 304 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 SH3PXD2BA1X283 911 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 TULP2O00295 520 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 ARPC3O15145 178 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 ZNHIT1O43257 154 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 OR1F1O43749 312 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 NDUFB10O96000 172 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 APRTP07741 180 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 GM2AP17900 193 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 ADORA1P30542 326 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 CYLC1P35663 651 aaPredicted RBP5.14□□□□□ -1.59
VPS53-219ENST00000576019 ERVPABLB-1P60509 514 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 RPL23AP62750 156 aaKnown RBP5.14□□□□□ -1.59
VPS53-219ENST00000576019 LTBQ06643 244 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 FGL1Q08830 312 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 DOC2AQ14183 400 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 KIR2DS5Q14953 304 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 CLPPQ16740 277 aaPredicted RBP5.14□□□□□ -1.59
VPS53-219ENST00000576019 TATDN3Q17R31 274 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 HKDC1Q2TB90 917 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 HSDL1Q3SXM5 330 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 CEP78Q5JTW2 689 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 OTUD1Q5VV17 481 aaPredicted RBP5.14□□□□□ -1.59
VPS53-219ENST00000576019 SLC27A4Q6P1M0 643 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 DHRS11Q6UWP2 260 aa5.14□□□□□ -1.59
VPS53-219ENST00000576019 VITQ6UXI7 678 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms