RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 TMEFF2Q9UIK5 374 aaPredicted RBP9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 BPTFQ12830 3046 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 ISM1B1AKI9 464 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 SURF4O15260 269 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 AK1P00568 194 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 CST1P01037 141 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 CLTBP09497 229 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 GABRA1P14867 456 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 NQO2P16083 231 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 GPX3P22352 226 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 PURAQ00577 322 aaKnown RBP9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 NRG1Q02297 640 aaPredicted RBP9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 TLE2Q04725 743 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 GBX1Q14549 363 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 ZNF678Q5SXM1 525 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 C10orf91Q5T1B1 145 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 HECTD2Q5U5R9 776 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 QSOX2Q6ZRP7 698 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 PEG10Q86TG7 708 aaKnown RBP9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 PPP1R3BQ86XI6 285 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 CHST14Q8NCH0 376 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 ACOT11Q8WXI4 607 aaPredicted RBP9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 RSC1A1Q92681 617 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 TPD52L3Q96J77 140 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 CPPED1Q9BRF8 314 aaPredicted RBP9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 POLDIP3Q9BY77 421 aaKnown RBP9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 SLC39A8Q9C0K1 460 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 IL1RL2Q9HB29 575 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 RBM22Q9NW64 420 aaKnown RBP eCLIP9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 PARPBPQ9NWS1 579 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 OSER1Q9NX31 292 aa9.9□□□□□ -0.82
CHRNB1-205ENST00000573209 UBA6A0AVT1 1052 aaPredicted RBP9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 LNP1A1A4G5 178 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 G3V3Q6 166 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 MATN4O95460 622 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 METTL15P1P0C7V9 234 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 CSF2RBP32927 897 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 HLXQ14774 488 aaPredicted RBP9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 SF1Q15637 639 aaKnown RBP9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 PLA1AQ53H76 456 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 FAM199XQ6PEV8 388 aaPredicted RBP9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 LRRN1Q6UXK5 716 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 CYHR1Q6ZMK1 362 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 CILP2Q8IUL8 1156 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 CLDN22Q8N7P3 220 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 NUDT10Q8NFP7 164 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 ING5Q8WYH8 240 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 CNOT9Q92600 299 aaKnown RBP9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 ZNF354BQ96LW1 612 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 OR1F2PQ96R84 312 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 DERL2Q9GZP9 239 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 C12orf49Q9H741 205 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 ANKRA2Q9H9E1 313 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 SLC6A20Q9NP91 592 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 PDP1Q9P0J1 537 aaPredicted RBP9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 OAS3Q9Y6K5 1087 aaKnown RBP9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 GREB1Q4ZG55 1949 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 A0A0J9YYE9 177 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 A0A1W2PQL4 384 aaPredicted RBP9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 AHRRA9YTQ3 701 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 UBFD1O14562 309 aaKnown RBP9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 CHST10O43529 356 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 ALDOCP09972 364 aaKnown RBP9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 CXCL2P19875 107 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 HRH2P25021 359 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 CHRNA4P43681 627 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 RABGGTBP53611 331 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 WNT3AP56704 352 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 SMN1Q16637 294 aaKnown RBP9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 GFOD2Q3B7J2 385 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 ARHGAP15Q53QZ3 475 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 NADSYN1Q6IA69 706 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 C1orf94Q6P1W5 598 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 PSRC1Q6PGN9 363 aaPredicted RBP9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 RANBP3LQ86VV4 465 aaPredicted RBP9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 THOC6Q86W42 341 aaKnown RBP9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 MIER2Q8N344 545 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 DNAJC5GQ8N7S2 189 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 RTL3Q8N8U3 475 aaKnown RBP9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 BEST4Q8NFU0 473 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 OR9I1Q8NGQ6 314 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 PHF21BQ96EK2 531 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 ATG101Q9BSB4 218 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 SPATA5L1Q9BVQ7 753 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 CHST5Q9GZS9 411 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 SIK2Q9H0K1 926 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 MFSD1Q9H3U5 465 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 EPHX3Q9H6B9 360 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 POPDC3Q9HBV1 291 aa9.89□□□□□ -0.83
CHRNB1-205ENST00000573209 A0A1W2PPE3 182 aa9.88□□□□□ -0.83
CHRNB1-205ENST00000573209 GTPBP1O00178 669 aaKnown RBP9.88□□□□□ -0.83
CHRNB1-205ENST00000573209 HAS3O00219 553 aa9.88□□□□□ -0.83
CHRNB1-205ENST00000573209 NR5A2O00482 541 aa9.88□□□□□ -0.83
CHRNB1-205ENST00000573209 STK25O00506 426 aa9.88□□□□□ -0.83
CHRNB1-205ENST00000573209 ZNF821O75541 412 aaPredicted RBP9.88□□□□□ -0.83
CHRNB1-205ENST00000573209 ZFPL1O95159 310 aa9.88□□□□□ -0.83
CHRNB1-205ENST00000573209 ADH1AP07327 375 aa9.88□□□□□ -0.83
CHRNB1-205ENST00000573209 NCF1P14598 390 aaPredicted RBP9.88□□□□□ -0.83
CHRNB1-205ENST00000573209 HOXB6P17509 224 aaKnown RBP9.88□□□□□ -0.83
CHRNB1-205ENST00000573209 YWHAQP27348 245 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms