RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 HNRNPCL4P0DMR1 293 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 CT45A8P0DMV1 189 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 CT45A9P0DMV2 189 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 ITGAMP11215 1152 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 NQO1P15559 274 aaKnown RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 NCK1P16333 377 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 GGT1P19440 569 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 PSMA4P25789 261 aaKnown RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 LCN1P31025 176 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 PIGAP37287 484 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 DCTP40126 519 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 EIF2S3P41091 472 aaKnown RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 MAN2A2P49641 1150 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 CLK3P49761 638 aaKnown RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 MVDP53602 400 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 KCNJ2P63252 427 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 PSG6Q00889 435 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 CHAF1BQ13112 559 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 SRSF6Q13247 344 aaKnown RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 VEZF1Q14119 521 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 EFR3AQ14156 821 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 TRIM25Q14258 630 aaKnown RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 LARS2Q15031 903 aaKnown RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 SYPL1Q16563 259 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 MEP1AQ16819 746 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 DEFB109BQ30KR1 87 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 ARHGAP11BQ3KRB8 267 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 LIN52Q52LA3 116 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 EIPR1Q53HC9 387 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 CT45A2Q5DJT8 189 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 CRB2Q5IJ48 1285 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 RPS26P11Q5JNZ5 115 aaPredicted RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 CCNJQ5T5M9 372 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF468Q5VIY5 522 aaPredicted RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 PRAMEF8Q5VWM4 474 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 PRAMEF7Q5VXH5 474 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 TCTN3Q6NUS6 607 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 OPN5Q6U736 354 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 NPSR1Q6W5P4 371 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 LRRC74BQ6ZQY2 392 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 GALNT10Q86SR1 603 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 CALHM3Q86XJ0 350 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 PTOV1Q86YD1 416 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 ARMC8Q8IUR7 673 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 DND1Q8IYX4 353 aaKnown RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 PRR22Q8IZ63 422 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF619Q8N2I2 560 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 GALNT16Q8N428 558 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 SLC15A4Q8N697 577 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 BCORP1Q8N888 145 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 ANKFN1Q8N957 763 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 FAM13CQ8NE31 585 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 CHDHQ8NE62 594 aaPredicted RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 BHLHE22Q8NFJ8 381 aaPredicted RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 BRIX1Q8TDN6 353 aaKnown RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 ELP5Q8TE02 316 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 SLC38A5Q8WUX1 472 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 WDR60Q8WVS4 1066 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 RASSF5Q8WWW0 418 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 LZICQ8WZA0 190 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 STMN2Q93045 179 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 POP5Q969H6 163 aaKnown RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 TMBIM1Q969X1 311 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 TP53INP1Q96A56 240 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 EFHD2Q96C19 240 aaPredicted RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 TMCO6Q96DC7 493 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 OMA1Q96E52 524 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF354BQ96LW1 612 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF583Q96ND8 569 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 COL21A1Q96P44 957 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 TREX2Q9BQ50 279 aaPredicted RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF350Q9GZX5 532 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 ING2Q9H160 280 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 HPF1Q9NWY4 346 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 GPR83Q9NYM4 423 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 KLRF1Q9NZS2 232 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 MYOTQ9UBF9 498 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 SLC7A8Q9UHI5 535 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF223Q9UK11 482 aaPredicted RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 SAMD4AQ9UPU9 718 aaKnown RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 ERVK-11Q9UQG0 969 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 GPR55Q9Y2T6 319 aaPredicted RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 RAXQ9Y2V3 346 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 YARS2Q9Y2Z4 477 aaKnown RBP6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 MED19A0JLT2 244 aaPredicted RBP6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 A6NL46 340 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 C1QTNF9BB2RNN3 333 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 ANKRD65E5RJM6 399 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 TO15178 435 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 NDUFB5O43674 189 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 PRKNO60260 465 aaPredicted RBP6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 PPM1BO75688 479 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 KCNK2O95069 426 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 PGM3O95394 542 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 IL33O95760 270 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 SERPINA1P01009 418 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 C1QCP02747 245 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 OPN1SWP03999 348 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 DBIP07108 87 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms