RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 RAD54L2Q9Y4B4 1467 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 IGKV2-28A0A075B6P5 120 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 A0A1W2PRQ8 180 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 E9PLD3 99 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 ZNF254O75437 659 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 TIMP1P01033 207 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 IGKV2D-28P01615 120 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 CHRNA1P02708 482 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 IGFBP1P08833 259 aaPredicted RBP1.9□□□□□ -2.11
UBR1-209ENST00000569243 SLC35G4P0C7Q5 338 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 PTBP1P26599 531 aaKnown RBP eCLIP1.9□□□□□ -2.11
UBR1-209ENST00000569243 PITPNBP48739 271 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 NUMBP49757 651 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 CASP9P55211 416 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 NME5P56597 212 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 NLRP11P59045 1033 aaKnown RBP1.9□□□□□ -2.11
UBR1-209ENST00000569243 RPS8P62241 208 aaKnown RBP1.9□□□□□ -2.11
UBR1-209ENST00000569243 ZP4Q12836 540 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 DAZ2Q13117 558 aaKnown RBP1.9□□□□□ -2.11
UBR1-209ENST00000569243 KCNJ11Q14654 390 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 ZKSCAN8Q15776 578 aaPredicted RBP1.9□□□□□ -2.11
UBR1-209ENST00000569243 LRRC36Q1X8D7 754 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 PARP6Q2NL67 630 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 LRIT3Q3SXY7 679 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 PRAMEF7Q5VXH5 474 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 ASPHD2Q6ICH7 369 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 STAC2Q6ZMT1 411 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 PAQR9Q6ZVX9 377 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 BNIPLQ7Z465 357 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 C17orf82Q86X59 251 aaPredicted RBP1.9□□□□□ -2.11
UBR1-209ENST00000569243 CCDC36Q8IYA8 594 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 LYPD1Q8N2G4 141 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 NEIL2Q969S2 332 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 MARC2Q969Z3 335 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 NRTNQ99748 197 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 CARD9Q9H257 536 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 PTGES2Q9H7Z7 377 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 APMAPQ9HDC9 416 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 DAZ3Q9NR90 486 aaKnown RBP1.9□□□□□ -2.11
UBR1-209ENST00000569243 FAM114A2Q9NRY5 505 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 HOMER3Q9NSC5 361 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 SPRR3Q9UBC9 169 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 FZR1Q9UM11 496 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 SAMD4AQ9UPU9 718 aaKnown RBP1.9□□□□□ -2.11
UBR1-209ENST00000569243 NEU3Q9UQ49 428 aa1.9□□□□□ -2.11
UBR1-209ENST00000569243 ANKRD30BQ9BXX2 1392 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 IGKV2D-24A0A075B6R9 120 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 A0A1B0GUA9 196 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 A0A1W2PQ67 120 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 TGDSO95455 350 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 CXCL14O95715 111 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 CDH5P33151 784 aaPredicted RBP1.89□□□□□ -2.11
UBR1-209ENST00000569243 RFC2P35250 354 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 TNNT3P45378 269 aaPredicted RBP1.89□□□□□ -2.11
UBR1-209ENST00000569243 CAV2P51636 162 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 NUP107P57740 925 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 RND3P61587 244 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 HERVK_113P63132 956 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 ERVK-8P63133 956 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 TEX44Q53QW1 395 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 ZNF691Q5VV52 312 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 NET1Q7Z628 596 aaPredicted RBP1.89□□□□□ -2.11
UBR1-209ENST00000569243 SERPINA9Q86WD7 417 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 PEX5LQ8IYB4 626 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 TMCO5AQ8N6Q1 288 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 C7orf33Q8WU49 177 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 HAVCR1Q96D42 359 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 NAP1L3Q99457 506 aaPredicted RBP1.89□□□□□ -2.11
UBR1-209ENST00000569243 CHRDL1Q9BU40 450 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 ERVK-6Q9BXR3 956 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 FTHL17Q9BXU8 183 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 MMADHCQ9H3L0 296 aaPredicted RBP1.89□□□□□ -2.11
UBR1-209ENST00000569243 GLIPR2Q9H4G4 154 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 DUS2Q9NX74 493 aaKnown RBP1.89□□□□□ -2.11
UBR1-209ENST00000569243 ANKMY1Q9P2S6 941 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 ZNF490Q9ULM2 529 aaPredicted RBP1.89□□□□□ -2.11
UBR1-209ENST00000569243 NAP1L2Q9ULW6 460 aaPredicted RBP1.89□□□□□ -2.11
UBR1-209ENST00000569243 DUSP12Q9UNI6 340 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 FKBP7Q9Y680 259 aa1.89□□□□□ -2.11
UBR1-209ENST00000569243 METP08581 1390 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 A0A1W2PRV1 198 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 TLR4O00206 839 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 SNAI2O43623 268 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 FMO6PO60774 539 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 ANP32DO95626 131 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 GCFC2P16383 781 aaKnown RBP1.88□□□□□ -2.11
UBR1-209ENST00000569243 RPL4P36578 427 aaKnown RBP1.88□□□□□ -2.11
UBR1-209ENST00000569243 RAG2P55895 527 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 PPP1R8Q12972 351 aaKnown RBP1.88□□□□□ -2.11
UBR1-209ENST00000569243 DPYSL3Q14195 570 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 IYDQ6PHW0 289 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 OLFM4Q6UX06 510 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 VPS36Q86VN1 386 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 IFNEQ86WN2 208 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 ZNF100Q8IYN0 542 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 FAM9BQ8IZU0 186 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 CENPSQ8N2Z9 138 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 C10orf53Q8N6V4 93 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 TPRX1Q8N7U7 411 aa1.88□□□□□ -2.11
UBR1-209ENST00000569243 OR9A1PQ8NGU1 263 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms