RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ALX1Q15699 326 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 UBE2SQ16763 222 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 SBK1Q52WX2 424 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 BMP2KLQ5H9B9 411 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 NHSL2Q5HYW2 709 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 SPATA46Q5T0L3 261 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 LYPLAL1Q5VWZ2 237 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 FAM219BQ5XKK7 198 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 WDR25Q64LD2 544 aaPredicted RBP1.16□□□□□ -2.22
SMG1-212ENST00000566328 MZT2BQ6NZ67 158 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 BTNL8Q6UX41 500 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 ARMCX2Q7L311 632 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 TDHQ8IZJ6 230 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 TMEM61Q8N0U2 210 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 NECAB1Q8N987 351 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 FAM133AQ8N9E0 248 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 C12orf42Q96LP6 360 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 SLC38A10Q9HBR0 1119 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 ZCCHC17Q9NP64 241 aaKnown RBP1.16□□□□□ -2.22
SMG1-212ENST00000566328 CYP39A1Q9NYL5 469 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 SWAP70Q9UH65 585 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 MAD2L2Q9UI95 211 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 NAP1L2Q9ULW6 460 aaPredicted RBP1.16□□□□□ -2.22
SMG1-212ENST00000566328 ATAD5Q96QE3 1844 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 RAI1Q7Z5J4 1906 aaPredicted RBP1.16□□□□□ -2.22
SMG1-212ENST00000566328 MYH4Q9Y623 1939 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 ATG2BQ96BY7 2078 aa1.16□□□□□ -2.22
SMG1-212ENST00000566328 TTC41PQ6P2S7 1318 aa1.15□□□□□ -2.22
SMG1-212ENST00000566328 SYNRGQ9UMZ2 1314 aa1.15□□□□□ -2.22
SMG1-212ENST00000566328 LOC400499M0QZD8 3231 aa1.15□□□□□ -2.22
SMG1-212ENST00000566328 DDX60LQ5H9U9 1706 aaKnown RBP1.15□□□□□ -2.22
SMG1-212ENST00000566328 ARAP2Q8WZ64 1704 aa1.15□□□□□ -2.22
SMG1-212ENST00000566328 FREM2Q5SZK8 3169 aa1.15□□□□□ -2.22
SMG1-212ENST00000566328 MYH8P13535 1937 aa1.15□□□□□ -2.22
SMG1-212ENST00000566328 KIAA1217Q5T5P2 1943 aa1.15□□□□□ -2.22
SMG1-212ENST00000566328 LOXHD1Q8IVV2 1947 aa1.15□□□□□ -2.22
SMG1-212ENST00000566328 GTF3C1Q12789 2109 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 BRWD1Q9NSI6 2320 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 KIR2DS1A0A191URI9 304 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 GSTTP1A0A1W2PQM5 241 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 SYNDIG1LA6NDD5 238 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 KBTBD13C9JR72 458 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 ANKRD63C9JTQ0 380 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 DDX39AO00148 427 aaKnown RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 AHCYL1O43865 530 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 SLC25A27O95847 323 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 IGHV3-23P01764 117 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 CHRNA1P02708 482 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 CA3P07451 260 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 ZFYP08048 801 aaPredicted RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 IQCF3P0C7M6 154 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 PVRP15151 417 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 RBMXP38159 391 aaKnown RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 CAPZA2P47755 286 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 OR3A4PP47883 348 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 DEFB103AP81534 67 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 ARHGAP1Q07960 439 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 KIR2DS1Q14954 304 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 CDC37Q16543 378 aaPredicted RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 UGCGQ16739 394 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 IMMTQ16891 758 aaKnown RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 HSDL1Q3SXM5 330 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 LRIT3Q3SXY7 679 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 SPATA1Q5VX52 437 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 CST9LP1Q5W188 147 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 ZSCAN25Q6NSZ9 544 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 IGFL1Q6UW32 110 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 RBPMS2Q6ZRY4 209 aaKnown RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 C11orf57Q6ZUT1 292 aaPredicted RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 OTOAQ7RTW8 1153 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 GMCL1P1Q8NEA9 526 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 OR6J1Q8NGC5 347 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 MARCH1Q8TCQ1 289 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 DEDD2Q8WXF8 326 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 ARNTL2Q8WYA1 636 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 SEPT8Q92599 483 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 TADA1Q96BN2 335 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 SLC35E1Q96K37 410 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 C9orf85Q96MD7 179 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 GLT1D1Q96MS3 346 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 JAKMIP1Q96N16 626 aaKnown RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 PRMT1Q99873 361 aaKnown RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 MTG1Q9BT17 334 aaPredicted RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 UPF3BQ9BZI7 483 aaKnown RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 ELOVL4Q9GZR5 314 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 LSG1Q9H089 658 aaKnown RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 ALDH8A1Q9H2A2 487 aaPredicted RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 CXCL16Q9H2A7 254 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 LY9Q9HBG7 655 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 TAS2R16Q9NYV7 291 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 ZNF223Q9UK11 482 aaPredicted RBP1.15□□□□□ -2.23
SMG1-212ENST00000566328 TBX21Q9UL17 535 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 SNX7Q9UNH6 387 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 GINS2Q9Y248 185 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 WSB1Q9Y6I7 421 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 FAM169AQ9Y6X4 670 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 DOCK1Q14185 1865 aa1.15□□□□□ -2.23
SMG1-212ENST00000566328 COL12A1Q99715 3063 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms