RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ZNF232Q9UNY5 417 aa7.18□□□□□ -1.26
CDH1-208ENST00000565810 FER1L5A0AVI2 2057 aa7.18□□□□□ -1.26
CDH1-208ENST00000565810 PRAMEF27A3QJZ7 478 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 CFAP73A6NFT4 308 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 H3BNH8 94 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 M0QX08 132 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 CXCR6O00574 342 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 SCDO00767 359 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 TSPAN2O60636 221 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 PDE5AO76074 875 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 OR6B1O95007 311 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 NADKO95544 446 aaPredicted RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 ITGB2P05107 769 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 DBIP07108 87 aaKnown RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 CHRM4P08173 479 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 ETS2P15036 469 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 IL7RP16871 459 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 ENDOUP21128 410 aaKnown RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 DCTP40126 519 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 SOX3P41225 446 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 HLCSP50747 726 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 ATP12AP54707 1039 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 FBXW4P57775 412 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 TRAP1Q12931 704 aaKnown RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 MFAP5Q13361 173 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 CEACAM7Q14002 265 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 TRIM25Q14258 630 aaKnown RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 LARS2Q15031 903 aaKnown RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 NTRK2Q16620 822 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 TBR1Q16650 682 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 ZSWIM7Q19AV6 140 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 TYW3Q6IPR3 259 aaKnown RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 ASRGL1Q7L266 308 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 GALNT10Q86SR1 603 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 PTRH1Q86Y79 214 aaKnown RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 PTOV1Q86YD1 416 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 HPS6Q86YV9 775 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 CYP4Z2PQ8N1L4 340 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 ZNF614Q8N883 585 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 FAM156AQ8NDB6 213 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 FAM13CQ8NE31 585 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 BHLHE22Q8NFJ8 381 aaPredicted RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 OR5M3Q8NGP4 307 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 SNRNP27Q8WVK2 155 aaKnown RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 RASSF5Q8WWW0 418 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 OIT3Q8WWZ8 545 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 LZICQ8WZA0 190 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 FAM162AQ96A26 154 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 CCDC124Q96CT7 223 aaKnown RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 CLPTM1LQ96KA5 538 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 LRGUKQ96M69 825 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 NSMCE2Q96MF7 247 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 SECISBP2Q96T21 854 aaKnown RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 TRIM15Q9C019 465 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 SAP130Q9H0E3 1048 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.17□□□□□ -1.26
CDH1-208ENST00000565810 HHATLQ9HCP6 504 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 TIMMDC1Q9NPL8 285 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 LRFN1Q9P244 771 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 SUCOQ9UBS9 1254 aaKnown RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 EGFL7Q9UHF1 273 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 MKLN1Q9UL63 735 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 ZMIZ1Q9ULJ6 1067 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 IFT52Q9Y366 437 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 PCDHGB7Q9Y5F8 929 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 PCDHGA9Q9Y5G4 932 aaKnown RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 PCDHGA10Q9Y5H3 936 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 SNX13Q9Y5W8 968 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 ZFHX4Q86UP3 3567 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 URB1O60287 2271 aaKnown RBP7.17□□□□□ -1.26
CDH1-208ENST00000565810 NCOR2Q9Y618 2525 aa7.17□□□□□ -1.26
CDH1-208ENST00000565810 OR5H15A6NDH6 313 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 KIAA0513O60268 411 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 MAN1A2O60476 641 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 FCMRO60667 390 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 ZNF354AO60765 605 aaPredicted RBP7.16□□□□□ -1.26
CDH1-208ENST00000565810 UGT2B11O75310 529 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 CEACAM4O75871 244 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 UTS2O95399 124 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 WDPCPO95876 746 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 IGKV1D-16P01601 117 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 P04436 131 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 CYP4B1P13584 511 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 CD46P15529 392 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 GGT1P19440 569 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 TBXA2RP21731 343 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 AQP1P29972 269 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 KDELR2P33947 212 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 EVI2BP34910 448 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 MSX2P35548 267 aaPredicted RBP7.16□□□□□ -1.26
CDH1-208ENST00000565810 POLE2P56282 527 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 FUT5Q11128 374 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 TUBA3CQ13748 450 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 ELOAQ14241 798 aaKnown RBP7.16□□□□□ -1.26
CDH1-208ENST00000565810 ZNF791Q3KP31 576 aaPredicted RBP7.16□□□□□ -1.26
CDH1-208ENST00000565810 LIN52Q52LA3 116 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 LRRC23Q53EV4 343 aaPredicted RBP7.16□□□□□ -1.26
CDH1-208ENST00000565810 MTX3Q5HYI7 312 aa7.16□□□□□ -1.26
CDH1-208ENST00000565810 ZNF311Q5JNZ3 666 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms