RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 TAC1P20366 129 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 PTNP21246 168 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 SSTR4P31391 388 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 PTGDSP41222 190 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 EFNA4P52798 201 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 CLDN15P56746 228 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 C21orf58P58505 322 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 BSPH1Q075Z2 132 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 DLG1Q12959 904 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 SCGB2A2Q13296 93 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 CASP8Q14790 479 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 KRT71Q3SY84 523 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 DEPDC1Q5TB30 811 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 SHISA2Q6UWI4 295 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 VN1R5Q7Z5H4 357 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 UBE3DQ7Z6J8 389 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 TRABD2AQ86V40 505 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 GPR180Q86V85 440 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 PDPRQ8NCN5 879 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 KBTBD8Q8NFY9 601 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 PIWIL2Q8TC59 973 aaKnown RBP8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 EPS8L3Q8TE67 593 aaKnown RBP8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 KCTD4Q8WVF5 259 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 HGDQ93099 445 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 TMCO6Q96DC7 493 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 CCDC126Q96EE4 140 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 GMPPAQ96IJ6 420 aaPredicted RBP8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 ZIM3Q96PE6 472 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 ATOH8Q96SQ7 321 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 EGFL8Q99944 293 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 MRPL46Q9H2W6 279 aaKnown RBP8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 SSU72Q9NP77 194 aaKnown RBP8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 GLRX2Q9NS18 164 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 MKS1Q9NXB0 559 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 NUDT4Q9NZJ9 180 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 CD274Q9NZQ7 290 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 STOML1Q9UBI4 398 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 MID2Q9UJV3 735 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 ZNF490Q9ULM2 529 aaPredicted RBP8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 NBEAL2Q6ZNJ1 2754 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 A0A1W2PPM1 405 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 NPEPPSL1A6NEC2 478 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 DPRXA6NFQ7 191 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 PRAMEF25A6NGN4 478 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 TRIM77I1YAP6 450 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 NDUFS8O00217 210 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 COPEO14579 308 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 CLGNO14967 610 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 TMPRSS2O15393 492 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 RAMP1O60894 148 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 SMIM24O75264 130 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 STK16O75716 305 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 SCELO95171 688 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 KRT4P19013 534 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 TCEA1P23193 301 aaKnown RBP8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 IL32P24001 234 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 TTKP33981 857 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 BUD31P41223 144 aaPredicted RBP8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 SSR2P43308 183 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 NR4A2P43354 598 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 PIK3CGP48736 1102 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 PDLIM4P50479 330 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 SUCLG1P53597 346 aaKnown RBP8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 PGGT1BP53609 377 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 ALDH18A1P54886 795 aaKnown RBP8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 DSCR4P56555 118 aaPredicted RBP8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 HMGCS1Q01581 520 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 ZNF844Q08AG5 666 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 LAPTM5Q13571 262 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 OR4D1Q15615 310 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 IQCCQ4KMZ1 466 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 TNFAIP8L3Q5GJ75 292 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 TECRLQ5HYJ1 363 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 CEP85LQ5SZL2 805 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 GTF2IRD2BQ6EKJ0 949 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 OR4C11Q6IEV9 310 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 TREML4Q6UXN2 200 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 GTF2IRD2Q86UP8 949 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 SLC22A9Q8IVM8 553 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 FBXL14Q8N1E6 418 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 ZNF615Q8N8J6 731 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 GBP7Q8N8V2 638 aaPredicted RBP8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 SNX31Q8N9S9 440 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 ZNF540Q8NDQ6 660 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 OR7G1Q8NGA0 311 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 OR2W6PQ8NHA6 318 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 ZNF418Q8TF45 676 aaPredicted RBP8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 PRR14Q9BWN1 585 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 IQCGQ9H095 443 aaKnown RBP8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 EHD1Q9H4M9 534 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 ALG9Q9H6U8 611 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 CXorf21Q9HAI6 301 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 GPRC5BQ9NZH0 403 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 PHF11Q9UIL8 331 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 FBXL2Q9UKC9 423 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 CFL2Q9Y281 166 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 ZNF337Q9Y3M9 751 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 PMF1-BGLAPU3KQ54 211 aa8.06□□□□□ -1.12
VPS9D1-205ENST00000565452 SMIM23A6NLE4 172 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 H0YC42 278 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms