RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 MED11Q9P086 117 aa9.08□□□□□ -0.96
CMTM3-209ENST00000565003 FOXD3Q9UJU5 478 aaPredicted RBP9.08□□□□□ -0.96
CMTM3-209ENST00000565003 ABCG2Q9UNQ0 655 aa9.08□□□□□ -0.96
CMTM3-209ENST00000565003 TRAF6Q9Y4K3 522 aa9.08□□□□□ -0.96
CMTM3-209ENST00000565003 AKAP9Q99996 3911 aa9.08□□□□□ -0.96
CMTM3-209ENST00000565003 MED12LQ86YW9 2145 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 H0YC42 278 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 HCRTR2O43614 444 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 RCBTB2O95199 551 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 UTS2O95399 124 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 TGM6O95932 706 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 PRPS2P11908 318 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 BCKDHAP12694 445 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 CREB1P16220 341 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 EFNA1P20827 205 aaPredicted RBP9.07□□□□□ -0.96
CMTM3-209ENST00000565003 MANFP55145 182 aaKnown RBP9.07□□□□□ -0.96
CMTM3-209ENST00000565003 TPD52P55327 224 aaPredicted RBP9.07□□□□□ -0.96
CMTM3-209ENST00000565003 DSCR4P56555 118 aaPredicted RBP9.07□□□□□ -0.96
CMTM3-209ENST00000565003 CLDN15P56746 228 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 GRAMD1BQ3KR37 738 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 XKR7Q5GH72 579 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 RAET1LQ5VY80 246 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 SPNS3Q6ZMD2 512 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 SZRD1Q7Z422 152 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 GALNT10Q86SR1 603 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 MARCH3Q86UD3 253 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 EXOC3L1Q86VI1 746 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 GRAMD2AQ8IUY3 354 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 UBQLNLQ8IYU4 475 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 NUP43Q8NFH3 380 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 OR5M1Q8NGP8 315 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 ZFP28Q8NHY6 868 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 FBXO30Q8TB52 745 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 GIMAP5Q96F15 307 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 ZBED6CLQ96FA7 236 aaPredicted RBP9.07□□□□□ -0.96
CMTM3-209ENST00000565003 LRRC46Q96FV0 321 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 OTUB1Q96FW1 271 aaPredicted RBP9.07□□□□□ -0.96
CMTM3-209ENST00000565003 ZFP3Q96NJ6 502 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 MS4A4EQ96PG1 132 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 TM9SF2Q99805 663 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 SFXN3Q9BWM7 321 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 POLDIP3Q9BY77 421 aaKnown RBP9.07□□□□□ -0.96
CMTM3-209ENST00000565003 CLEC4MQ9H2X3 399 aaPredicted RBP9.07□□□□□ -0.96
CMTM3-209ENST00000565003 LIME1Q9H400 295 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 RASSF1Q9NS23 344 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 SH3BP4Q9P0V3 963 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 NTMQ9P121 344 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.07□□□□□ -0.96
CMTM3-209ENST00000565003 TMED5Q9Y3A6 229 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 V9GYY5 206 aaPredicted RBP9.07□□□□□ -0.96
CMTM3-209ENST00000565003 HIVEP1P15822 2718 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 PCNX3Q9H6A9 2034 aa9.07□□□□□ -0.96
CMTM3-209ENST00000565003 MPDZO75970 2070 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 CELSR1Q9NYQ6 3014 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 TUBAL3A6NHL2 446 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 A6NNC1 897 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 GMFGO60234 142 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 TNFSF13O75888 250 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 NKX2-2O95096 273 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 KCNH1O95259 989 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 ACP2P11117 423 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 HK1P19367 917 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 GPC1P35052 558 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 ETV4P43268 484 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 ASMTP46597 345 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 SUCLG1P53597 346 aaKnown RBP9.06□□□□□ -0.96
CMTM3-209ENST00000565003 PRKAG1P54619 331 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 PSMD4P55036 377 aaKnown RBP9.06□□□□□ -0.96
CMTM3-209ENST00000565003 PRR5P85299 388 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 SORDQ00796 357 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 GANABQ14697 944 aaKnown RBP9.06□□□□□ -0.96
CMTM3-209ENST00000565003 BCL2A1Q16548 175 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 DUSP5Q16690 384 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 MFSD12Q6NUT3 480 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 WDR93Q6P2C0 686 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 EMBQ6PCB8 327 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 ZAR1Q86SH2 424 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 LUZP2Q86TE4 346 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 CDRT4Q8N9R6 151 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 SLC16A11Q8NCK7 471 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 OR6Y1Q8NGX8 325 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 OR4C3Q8NH37 302 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 LINC01560Q8TB33 94 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 GPR151Q8TDV0 419 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 DUSP19Q8WTR2 217 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 FAM222BQ8WU58 562 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 SLC9A6Q92581 669 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 CAVIN3Q969G5 261 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 MTERF3Q96E29 417 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 C1GALT1C1Q96EU7 318 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 C16orf58Q96GQ5 468 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 PPP3R2Q96LZ3 170 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 C3orf30Q96M34 536 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 C1orf50Q9BV19 199 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 RBM24Q9BX46 236 aaKnown RBP9.06□□□□□ -0.96
CMTM3-209ENST00000565003 TBL1XR1Q9BZK7 514 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 ROPN1BQ9BZX4 212 aaPredicted RBP9.06□□□□□ -0.96
CMTM3-209ENST00000565003 ROPN1Q9HAT0 212 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms