RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 NME6O75414 186 aaPredicted RBP15.28■□□□□ 0.04
LINC00554-201ENST00000564841 H2AFB2P0C5Z0 115 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 JUPP14923 745 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 EPCAMP16422 314 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 SLC6A11P48066 632 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 OC90Q02509 493 aaPredicted RBP15.28■□□□□ 0.04
LINC00554-201ENST00000564841 CD200R1LQ6Q8B3 271 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 FAM26EQ8N5C1 309 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 ZFPM2Q8WW38 1151 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 SPRYD4Q8WW59 207 aaPredicted RBP15.28■□□□□ 0.04
LINC00554-201ENST00000564841 ERMAPQ96PL5 475 aaPredicted RBP15.28■□□□□ 0.04
LINC00554-201ENST00000564841 ORAI3Q9BRQ5 295 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 RDH14Q9HBH5 336 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 CA10Q9NS85 328 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 TMEM202A6NGA9 273 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 M0R3H8 397 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 SH3BP5O60239 455 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 WNT1P04628 370 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 GLAP06280 429 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 HIST1H2AGP0C0S8 130 aaPredicted RBP15.28■□□□□ 0.04
LINC00554-201ENST00000564841 DRD2P14416 443 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 HIST1H2ADP20671 130 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 PBLDP30039 288 aaPredicted RBP15.28■□□□□ 0.04
LINC00554-201ENST00000564841 B4GALNT1Q00973 533 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 ZNF155Q12901 538 aaPredicted RBP15.28■□□□□ 0.04
LINC00554-201ENST00000564841 PODNL1Q6PEZ8 512 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 FBXO46Q6PJ61 603 aaPredicted RBP15.28■□□□□ 0.04
LINC00554-201ENST00000564841 PAQR7Q86WK9 346 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 TOMM5Q8N4H5 51 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 C12orf76Q8N812 135 aaPredicted RBP15.28■□□□□ 0.04
LINC00554-201ENST00000564841 THAP4Q8WY91 577 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 HIST1H2AHQ96KK5 128 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 TBX5Q99593 518 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 HIST1H2AJQ99878 128 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 SGK2Q9HBY8 427 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 CYSLTR2Q9NS75 346 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 PTGFRNQ9P2B2 879 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 ACSL5Q9ULC5 683 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 COL4A6Q14031 1691 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 A0A1W2PPK0 400 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 TBXA2RP21731 343 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 MTNR1AP48039 350 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 SLC6A12P48065 614 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 PITPNBP48739 271 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 PCBP3P57721 371 aaKnown RBP15.27■□□□□ 0.04
LINC00554-201ENST00000564841 RPS13P62277 151 aaKnown RBP15.27■□□□□ 0.04
LINC00554-201ENST00000564841 E2F1Q01094 437 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 DEFA5Q01523 94 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 CDKL4Q5MAI5 379 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 CERS6Q6ZMG9 384 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 IQCHQ86VS3 1027 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 C7orf61Q8IZ16 206 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 C2orf73Q8N5S3 287 aaPredicted RBP15.27■□□□□ 0.04
LINC00554-201ENST00000564841 OR5M3Q8NGP4 307 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 OR8K3Q8NH51 312 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 WDR20Q8TBZ3 569 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 ZNF768Q9H5H4 540 aaKnown RBP15.27■□□□□ 0.04
LINC00554-201ENST00000564841 ZDHHC6Q9H6R6 413 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 IL23AQ9NPF7 189 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 NDOR1Q9UHB4 597 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 KCND3Q9UK17 655 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 LIPT1Q9Y234 373 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 WNT6Q9Y6F9 365 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 ARPC4-TTLL3A0A0A6YYG9 625 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 H1F0P07305 194 aaKnown RBP15.27■□□□□ 0.04
LINC00554-201ENST00000564841 SLC1A3P43003 542 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 MAZP56270 477 aaKnown RBP15.27■□□□□ 0.04
LINC00554-201ENST00000564841 SLC25A35Q3KQZ1 300 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 GGTA1PQ4G0N0 100 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 LRRC70Q7Z2Q7 622 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 BBS1Q8NFJ9 593 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 FCRL1Q96LA6 429 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 CORO2BQ9UQ03 480 aa15.27■□□□□ 0.04
LINC00554-201ENST00000564841 PPIBP23284 216 aaKnown RBP15.27■□□□□ 0.03
LINC00554-201ENST00000564841 HLA-FP30511 346 aa15.27■□□□□ 0.03
LINC00554-201ENST00000564841 HNMTP50135 292 aa15.27■□□□□ 0.03
LINC00554-201ENST00000564841 TMEM255AQ5JRV8 349 aa15.27■□□□□ 0.03
LINC00554-201ENST00000564841 EOGTQ5NDL2 527 aa15.27■□□□□ 0.03
LINC00554-201ENST00000564841 GRASPQ7Z6J2 395 aaPredicted RBP15.27■□□□□ 0.03
LINC00554-201ENST00000564841 BOLLQ8N9W6 283 aaKnown RBP15.27■□□□□ 0.03
LINC00554-201ENST00000564841 OR4D9Q8NGE8 314 aa15.27■□□□□ 0.03
LINC00554-201ENST00000564841 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.27■□□□□ 0.03
LINC00554-201ENST00000564841 MGAT4BQ9UQ53 548 aa15.27■□□□□ 0.03
LINC00554-201ENST00000564841 PRELID3BQ9Y3B1 194 aa15.27■□□□□ 0.03
LINC00554-201ENST00000564841 CHST2Q9Y4C5 530 aa15.27■□□□□ 0.03
LINC00554-201ENST00000564841 A8MXK9 166 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 TRANK1O15050 2925 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 PRMT3O60678 531 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 TFP02787 698 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 RAB3AP20336 220 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 RASGRP3Q8IV61 690 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 ZNF485Q8NCK3 441 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 CYB5D2Q8WUJ1 264 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 POLDIP3Q9BY77 421 aaKnown RBP15.26■□□□□ 0.03
LINC00554-201ENST00000564841 OR10A4Q9H209 315 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 NANSQ9NR45 359 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 KIF25Q9UIL4 384 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 INSL6Q9Y581 213 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 NUBP2Q9Y5Y2 271 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 SESN1Q9Y6P5 492 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms