RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 HBS1LQ9Y450 684 aaKnown RBP3.31□□□□□ -1.88
CHD9-212ENST00000564641 CDH23Q9H251 3354 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 MCM3APO60318 1980 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 TCHHQ07283 1943 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 ABCB11O95342 1321 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 WDR19Q8NEZ3 1342 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 IGLV4-3A0A075B6K6 122 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 A0A1W2PRV1 198 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 TTC26A0AVF1 554 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 SIGLEC16A6NMB1 481 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 GOLGA8TH3BQL2 631 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 BOLA2-SMG1P6H3BVE0 249 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 CPLX1O14810 134 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 MAGEB3O15480 346 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 RAD51CO43502 376 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 CYTH3O43739 400 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 SELENOFO60613 162 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 SNAP91O60641 907 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 DCTN3O75935 186 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 PSMG1O95456 288 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 OXSR1O95747 527 aaPredicted RBP3.3□□□□□ -1.88
CHD9-212ENST00000564641 SNAI1O95863 264 aaPredicted RBP3.3□□□□□ -1.88
CHD9-212ENST00000564641 OAS1P00973 400 aaKnown RBP3.3□□□□□ -1.88
CHD9-212ENST00000564641 GH1P01241 217 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 SHBGP04278 402 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 PABPC4LP0CB38 370 aaKnown RBP3.3□□□□□ -1.88
CHD9-212ENST00000564641 GSTT2P0CG29 244 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 GSTT2BP0CG30 244 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 GOLGA8HP0CJ92 632 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 UROSP10746 265 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 P4HA1P13674 534 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 MYOGP15173 224 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 POLR2EP19388 210 aaKnown RBP3.3□□□□□ -1.88
CHD9-212ENST00000564641 BCL3P20749 454 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 CD27P26842 260 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 PTPN4P29074 926 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 ETV5P41161 510 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 IER3P46695 156 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 CDX1P47902 265 aaPredicted RBP3.3□□□□□ -1.88
CHD9-212ENST00000564641 IFNAR2P48551 515 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 RGS7P49802 495 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 VAMP7P51809 220 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 DHODHQ02127 395 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 PPIDQ08752 370 aaKnown RBP3.3□□□□□ -1.88
CHD9-212ENST00000564641 NPTX1Q15818 432 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 UAP1Q16222 522 aaPredicted RBP3.3□□□□□ -1.88
CHD9-212ENST00000564641 BCL2A1Q16548 175 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 RNF212Q495C1 297 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 MCMDC2Q4G0Z9 681 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 SLC39A12Q504Y0 691 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 TMEM31Q5JXX7 168 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 CXCL17Q6UXB2 119 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 NUP54Q7Z3B4 507 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 FGFRL1Q8N441 504 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 RIBC1Q8N443 379 aaPredicted RBP3.3□□□□□ -1.88
CHD9-212ENST00000564641 RTL3Q8N8U3 475 aaKnown RBP3.3□□□□□ -1.88
CHD9-212ENST00000564641 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.3□□□□□ -1.88
CHD9-212ENST00000564641 GIPC3Q8TF64 312 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 ST6GALNAC6Q969X2 333 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 ANKRD36BP1Q96IX9 119 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 ZNF597Q96LX8 424 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 ZNF577Q9BSK1 485 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 SPXQ9BT56 116 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 CACNG6Q9BXT2 260 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 NDEL1Q9GZM8 345 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 SLC5A7Q9GZV3 580 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 AZI2Q9H6S1 392 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 COMMD8Q9NX08 183 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 AIPL1Q9NZN9 384 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 IL19Q9UHD0 177 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 RWDD2AQ9UIY3 292 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 MRPL11Q9Y3B7 192 aaKnown RBP3.3□□□□□ -1.88
CHD9-212ENST00000564641 FAM32AQ9Y421 112 aaKnown RBP3.3□□□□□ -1.88
CHD9-212ENST00000564641 HEY1Q9Y5J3 304 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 MUC3AQ02505 3323 aa3.3□□□□□ -1.88
CHD9-212ENST00000564641 PRRC2BQ5JSZ5 2229 aaKnown RBP3.29□□□□□ -1.88
CHD9-212ENST00000564641 EYSQ5T1H1 3165 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 MYH6P13533 1939 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 TRAV24A0A0B4J272 114 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 A0A0D9SFI3 127 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 TRBV5-5A0A0J9YX44 114 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 C13orf42A0A1B0GVH6 325 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 IQCMA0A1B0GVH7 501 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 A0A1W2PPK0 400 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 TRIM64CA6NLI5 447 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 M0QZ92 97 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 NDC80O14777 642 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 MCF2LO15068 1137 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 PFDN6O15212 129 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 SURF4O15260 269 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 PRKAB2O43741 272 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 SEC22BO75396 215 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 SERPINB7O75635 380 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 CIB2O75838 187 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 HSPD1P10809 573 aaKnown RBP3.29□□□□□ -1.88
CHD9-212ENST00000564641 CALML3P27482 149 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 PHBP35232 272 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 CCL23P55773 120 aa3.29□□□□□ -1.88
CHD9-212ENST00000564641 RPL26P61254 145 aaKnown RBP3.29□□□□□ -1.88
CHD9-212ENST00000564641 ASPHQ12797 758 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms