RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 OR6S1Q8NH40 331 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 DNAJB8Q8NHS0 232 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 ZDHHC1Q8WTX9 485 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 SFT2D1Q8WV19 159 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 C10orf90Q96M02 699 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 DNTTIP1Q9H147 329 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 DPAGT1Q9H3H5 408 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 MTG2Q9H4K7 406 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 FZD3Q9NPG1 666 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 ENAMQ9NRM1 1142 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 ACAD8Q9UKU7 415 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 KIF26AQ9ULI4 1882 aaPredicted RBP12.49□□□□□ -0.41
CLK3-206ENST00000562078 PMS2P1A4D2B8 440 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 TTLL8A6PVC2 850 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 FAM227AF5H4B4 570 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 L7N2F9 121 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 ZNF806P0C7X5 589 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 PTBP1P26599 531 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLK3-206ENST00000562078 ACADLP28330 430 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 ETV5P41161 510 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 GSTM5P46439 218 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 RPS14P62263 151 aaKnown RBP12.49□□□□□ -0.41
CLK3-206ENST00000562078 SP140Q13342 867 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 ARHGEF7Q14155 803 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 NCF4Q15080 339 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 POM121L1PQ3SYA9 428 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 PLK5Q496M5 336 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 CHRDL2Q6WN34 429 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 ZNF621Q6ZSS3 439 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 RAB11FIP2Q7L804 512 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 PLA2G15Q8NCC3 412 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 FAM46DQ8NEK8 389 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 OR4A15Q8NGL6 344 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 TSSK6Q9BXA6 273 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 PRDM9Q9NQV7 894 aa12.49□□□□□ -0.41
CLK3-206ENST00000562078 A0A0G2JPF8 293 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 HNRNPCL3B7ZW38 293 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 D6RAR5 112 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 MPZL2O60487 215 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 MTX2O75431 263 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 LEFTY1O75610 366 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 HNRNPCL4P0DMR1 293 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 CCR7P32248 378 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 VIPR2P41587 438 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 CRISP1P54107 249 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 LYPD4Q6UWN0 246 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 QSOX2Q6ZRP7 698 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 SHFQ7M4L6 423 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 NPAS3Q8IXF0 933 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 ZFP82Q8N141 532 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 AQP11Q8NBQ7 271 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 SKA2Q8WVK7 121 aaPredicted RBP12.48□□□□□ -0.41
CLK3-206ENST00000562078 SCAMP4Q969E2 229 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 PANX1Q96RD7 426 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 DOHHQ9BU89 302 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 CRB3Q9BUF7 120 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 SPRTNQ9H040 489 aaPredicted RBP12.48□□□□□ -0.41
CLK3-206ENST00000562078 IMP3Q9NV31 184 aaKnown RBP12.48□□□□□ -0.41
CLK3-206ENST00000562078 MRTO4Q9UKD2 239 aaKnown RBP12.48□□□□□ -0.41
CLK3-206ENST00000562078 SF3B6Q9Y3B4 125 aaKnown RBP12.48□□□□□ -0.41
CLK3-206ENST00000562078 NUBP2Q9Y5Y2 271 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 IGLV3-16A0A075B6K0 115 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 PRAMEF25A6NGN4 478 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 TLR4O00206 839 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 GATCO43716 136 aaKnown RBP12.48□□□□□ -0.41
CLK3-206ENST00000562078 SDC3O75056 442 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 GATBO75879 557 aaKnown RBP12.48□□□□□ -0.41
CLK3-206ENST00000562078 SOX14O95416 240 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 GASTP01350 101 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 DRD2P14416 443 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 ACPPP15309 386 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 POLR2LP62875 67 aaKnown RBP12.48□□□□□ -0.41
CLK3-206ENST00000562078 MC2RQ01718 297 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 BOP1Q14137 746 aaKnown RBP12.48□□□□□ -0.41
CLK3-206ENST00000562078 RNASE12Q5GAN4 147 aaKnown RBP12.48□□□□□ -0.41
CLK3-206ENST00000562078 FAM74A1Q5RGS3 127 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 MEDAGQ5VYS4 303 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 IL20RBQ6UXL0 311 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 RBMS3Q6XE24 437 aaKnown RBP12.48□□□□□ -0.41
CLK3-206ENST00000562078 GATAD2BQ8WXI9 593 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 FGF13Q92913 245 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 NIT2Q9NQR4 276 aa12.48□□□□□ -0.41
CLK3-206ENST00000562078 WASH3PC4AMC7 463 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 FPGTO14772 594 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 TO15178 435 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 ULK1O75385 1050 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 SPP1P10451 314 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 AHCYP23526 432 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 GANABQ14697 944 aaKnown RBP12.47□□□□□ -0.41
CLK3-206ENST00000562078 ZNF124Q15973 351 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 ARSIQ5FYB1 569 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 SERPINA13PQ6UXR4 307 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 HSD11B1LQ7Z5J1 315 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 SCARB1Q8WTV0 552 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 UBTD2Q8WUN7 234 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 EDARADDQ8WWZ3 215 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 OTUB2Q96DC9 234 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 MRGPRX3Q96LB0 322 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 MAPKAP1Q9BPZ7 522 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 ZNF576Q9H609 170 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms