RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 SCML1Q9UN30 329 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 EXOC7Q9UPT5 735 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 CCL26Q9Y258 94 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 FOXA2Q9Y261 457 aaPredicted RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 EXOGQ9Y2C4 368 aaKnown RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 ETV7Q9Y603 341 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 MYO15AQ9UKN7 3530 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 ZNFX1Q9P2E3 1918 aaKnown RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 A0A1W2PR80 420 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 FAM92AA1XBS5 289 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 TRABD2BA6NFA1 517 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 SGK1O00141 431 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 CCSO14618 274 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 CACNG3O60359 315 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 ZG16O60844 167 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 LYNP07948 512 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 OR4Q2P0C623 313 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 CXCL8P10145 99 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 SKILP12757 684 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 EZRP15311 586 aaKnown RBP3.18□□□□□ -1.9
HERC1-215ENST00000561436 GABRG2P18507 467 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 U2AF2P26368 475 aaKnown RBP eCLIP3.18□□□□□ -1.91e-8■■■■■ 26.9
HERC1-215ENST00000561436 ANXA13P27216 316 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 OSTNP61366 133 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 ERVK-16P61578 105 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 CSNK2BP67870 215 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 C17orf67Q0P5P2 114 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 OVGP1Q12889 678 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 PPP1R8Q12972 351 aaKnown RBP3.18□□□□□ -1.9
HERC1-215ENST00000561436 GPR50Q13585 617 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 TRA2AQ13595 282 aaKnown RBP eCLIP3.18□□□□□ -1.9
HERC1-215ENST00000561436 ENPP2Q13822 863 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 CES4AQ5XG92 561 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 WSCD1Q658N2 575 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 TMEM64Q6YI46 380 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 CYP4V2Q6ZWL3 525 aaPredicted RBP3.18□□□□□ -1.9
HERC1-215ENST00000561436 Q71RC1 249 aaPredicted RBP3.18□□□□□ -1.9
HERC1-215ENST00000561436 SLC22A15Q8IZD6 547 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 ALLCQ8N6M5 410 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 C4orf32Q8N8J7 132 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 OR5M9Q8NGP3 310 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 OR2T6Q8NHC8 308 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 SCFD1Q8WVM8 642 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 HAS2Q92819 552 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 FGF11Q92914 225 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 SLC35C1Q96A29 364 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 ZNF578Q96N58 590 aaPredicted RBP3.18□□□□□ -1.9
HERC1-215ENST00000561436 RUFY1Q96T51 708 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 LITAFQ99732 161 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 PAPOLGQ9BWT3 736 aaKnown RBP3.18□□□□□ -1.9
HERC1-215ENST00000561436 ELOVL4Q9GZR5 314 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 DDX47Q9H0S4 455 aaKnown RBP3.18□□□□□ -1.9
HERC1-215ENST00000561436 TMEM245Q9H330 911 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 FBXO44Q9H4M3 255 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 CLMPQ9H6B4 373 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 ZDHHC6Q9H6R6 413 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 KCNK13Q9HB14 408 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 PARVGQ9HBI0 331 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 GPN1Q9HCN4 374 aaPredicted RBP3.18□□□□□ -1.9
HERC1-215ENST00000561436 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.18□□□□□ -1.9
HERC1-215ENST00000561436 DDX19AQ9NUU7 478 aaKnown RBP3.18□□□□□ -1.9
HERC1-215ENST00000561436 PLEK2Q9NYT0 353 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 IL37Q9NZH6 218 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 TUBGCP4Q9UGJ1 667 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 IL19Q9UHD0 177 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 APPL1Q9UKG1 709 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 TSPAN16Q9UKR8 245 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 KIF3AQ9Y496 699 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 WIPI2Q9Y4P8 454 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 ANGPTL3Q9Y5C1 460 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 PTPRSQ13332 1948 aa3.18□□□□□ -1.9
HERC1-215ENST00000561436 BAZ2AQ9UIF9 1905 aaKnown RBP3.18□□□□□ -1.9
HERC1-215ENST00000561436 DNAH14Q0VDD8 3507 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 NCOR2Q9Y618 2525 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 IGLV7-46A0A075B6I9 117 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 TMCO5BA8MYB1 307 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 H0YIG0 161 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 NR5A2O00482 541 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 INPP4BO15327 924 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 SLC16A4O15374 487 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 PSMD3O43242 534 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 ARHGEF9O43307 516 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 CTDNEP1O95476 244 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 ABHD2P08910 425 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 ZDHHC11BP0C7U3 371 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 AREGP15514 252 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 WARSP23381 471 aaKnown RBP3.17□□□□□ -1.9
HERC1-215ENST00000561436 OPRL1P41146 370 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 ALDH3B1P43353 468 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 NSFP46459 744 aaKnown RBP3.17□□□□□ -1.9
HERC1-215ENST00000561436 CSRP3P50461 194 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 AP3M2P53677 418 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 SLC12A3P55017 1021 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 CASP9P55211 416 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 UCP2P55851 309 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 ERVPABLB-1P60509 514 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 LASP1Q14847 261 aaKnown RBP3.17□□□□□ -1.9
HERC1-215ENST00000561436 KRT31Q15323 416 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 SPANXN4Q5MJ08 99 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 C1orf189Q5VU69 101 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms