RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 FAM90A27PA6NNH2 459 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 SLCO1B7G3V0H7 640 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 SNNO75324 88 aaPredicted RBP11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 NKX2-2O95096 273 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 HOXD4P09016 255 aaPredicted RBP11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 ACP2P11117 423 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 BMP7P18075 431 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 DPP4P27487 766 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 EPHA3P29320 983 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 CHRNB4P30926 498 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 KIR3DL1P43629 444 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 SRYQ05066 204 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 CRYZQ08257 329 aaKnown RBP11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 SF3B4Q15427 424 aaKnown RBP eCLIP11.81□□□□□ -0.523e-15■■■■□ 20.1
CTDSPL2-209ENST00000560620 CDSNQ15517 529 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 DUSP5Q16690 384 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 ZCCHC12Q6PEW1 402 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 BHLHB9Q6PI77 547 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 ENPP6Q6UWR7 440 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 MARCH3Q86UD3 253 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 RIMKLAQ8IXN7 391 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 VPS37AQ8NEZ2 397 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 OR56A1Q8NGH5 318 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 OR4A15Q8NGL6 344 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 ADAMTS15Q8TE58 950 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 DYDC1Q8WWB3 177 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 ATP6V1G3Q96LB4 118 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 DSN1Q9H410 356 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 WDR55Q9H6Y2 383 aaPredicted RBP11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 RUBCNLQ9H714 662 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 CXorf36Q9H7Y0 433 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 PTGES2Q9H7Z7 377 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 SIRT3Q9NTG7 399 aaPredicted RBP11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 FAM120CQ9NX05 1096 aaKnown RBP11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 NTMQ9P121 344 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 ABCG2Q9UNQ0 655 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 FAM215AQ9Y5M1 114 aa11.81□□□□□ -0.52
CTDSPL2-209ENST00000560620 NCOA6Q14686 2063 aaPredicted RBP11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 C17orf51A8MQB3 221 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 AHRRA9YTQ3 701 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 FAM47E-STBD1D6RA91 191 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 HNRNPRO43390 633 aaKnown RBP11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 FADS1O60427 444 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 KCNK2O95069 426 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 CPSF4O95639 269 aaKnown RBP11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 ANGPTL1O95841 491 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 ACTL6AO96019 429 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 IGKV1D-16P01601 117 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 KRT16P08779 473 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 GLI4P10075 376 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 COX6B1P14854 86 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 ATP6V1C1P21283 382 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 SRD5A2P31213 254 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 PTGER4P35408 488 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 CLNS1AP54105 237 aaKnown RBP11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 HBA1P69905 142 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 POU6F2P78424 691 aaPredicted RBP11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 RCAN2Q14206 197 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 ZNF630Q2M218 657 aaPredicted RBP11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 GRAMD1BQ3KR37 738 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 CCNJQ5T5M9 372 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 VASNQ6EMK4 673 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 RTL6Q6ICC9 239 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 AAGABQ6PD74 315 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 WDR75Q8IWA0 830 aaKnown RBP11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 CLECL1Q8IZS7 167 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 LRRC8CQ8TDW0 803 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 DUSP19Q8WTR2 217 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 ZNF75CPQ92670 426 aaPredicted RBP11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 CDS1Q92903 461 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 MARVELD3Q96A59 401 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 MOAP1Q96BY2 351 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 GIMAP5Q96F15 307 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 SFXN2Q96NB2 322 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 TRIB1Q96RU8 372 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 ZBTB18Q99592 522 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 G6PC3Q9BUM1 346 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 UGT2B28Q9BY64 529 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 ACTRT3Q9BYD9 372 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 MED11Q9P086 117 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 PCDHGB3Q9Y5G1 929 aa11.8□□□□□ -0.52
CTDSPL2-209ENST00000560620 PHF3Q92576 2039 aaKnown RBP11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 RNF103-CHMP3A0A140T963 221 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 NKX2-6A6NCS4 301 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 H0Y3Z8 333 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 RNASET2O00584 256 aaKnown RBP11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 SCDO00767 359 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 SDHDO14521 159 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 NDUFB5O43674 189 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 HK1P19367 917 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 ZFP36L2P47974 494 aaKnown RBP11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 GAS1P54826 345 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 DSCR4P56555 118 aaPredicted RBP11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 C21orf58P58505 322 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 OCRLQ01968 901 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 C17orf67Q0P5P2 114 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 FAM174BQ3ZCQ3 159 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 DCST1Q5T197 706 aa11.79□□□□□ -0.52
CTDSPL2-209ENST00000560620 ANXA8L1Q5VT79 327 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms