RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 MATN1P21941 496 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 IL10P22301 178 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 MMP11P24347 488 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 KHKP50053 298 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 GPR143P51810 404 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 CRYBA2P53672 197 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 SLC37A1P57057 533 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 RPS15P62841 145 aaKnown RBP4.82□□□□□ -1.64
SPG11-220ENST00000559933 TEKQ02763 1124 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 FUT7Q11130 342 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 MAP4K2Q12851 820 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 SERTAD2Q14140 314 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 MLC1Q15049 377 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 EBPQ15125 230 aaKnown RBP4.82□□□□□ -1.64
SPG11-220ENST00000559933 ELAVL1Q15717 326 aaKnown RBP4.82□□□□□ -1.64
SPG11-220ENST00000559933 CYP51A1Q16850 503 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 BTBD16Q32M84 506 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 DNAL1Q4LDG9 190 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 PIGGQ5H8A4 983 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 GCNT6Q5T4J0 391 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 B3GNTL1Q67FW5 361 aaPredicted RBP4.82□□□□□ -1.64
SPG11-220ENST00000559933 CYP2R1Q6VVX0 501 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 NLRC3Q7RTR2 1065 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 YTHDF3Q7Z739 585 aaKnown RBP4.82□□□□□ -1.64
SPG11-220ENST00000559933 COMTD1Q86VU5 262 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 CALHM3Q86XJ0 350 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 FBXW8Q8N3Y1 598 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 SIRT6Q8N6T7 355 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 FAM86B1Q8N7N1 296 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 SLC16A11Q8NCK7 471 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 APCDD1LQ8NCL9 501 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 OR11G2Q8NGC1 345 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 OR8J3Q8NGG0 315 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 OR56A1Q8NGH5 318 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 SFXN5Q8TD22 340 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 WDR60Q8WVS4 1066 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 METTL21AQ8WXB1 218 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 FIG4Q92562 907 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 MCUR1Q96AQ8 359 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 RMND5BQ96G75 393 aaPredicted RBP4.82□□□□□ -1.64
SPG11-220ENST00000559933 SLC35A4Q96G79 324 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 RBM18Q96H35 190 aaKnown RBP4.82□□□□□ -1.64
SPG11-220ENST00000559933 TMEM19Q96HH6 336 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 VSTM2LQ96N03 204 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 ZNF583Q96ND8 569 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 KCTD14Q9BQ13 255 aaPredicted RBP4.82□□□□□ -1.64
SPG11-220ENST00000559933 RSPO3Q9BXY4 272 aaPredicted RBP4.82□□□□□ -1.64
SPG11-220ENST00000559933 WWTR1Q9GZV5 400 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 NXF5Q9H1B4 397 aaKnown RBP4.82□□□□□ -1.64
SPG11-220ENST00000559933 OR10A5Q9H207 317 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 CLK4Q9HAZ1 481 aaKnown RBP4.82□□□□□ -1.64
SPG11-220ENST00000559933 P4HTMQ9NXG6 502 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 PTGFRNQ9P2B2 879 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 CD300AQ9UGN4 299 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 NXT1Q9UKK6 140 aaKnown RBP4.82□□□□□ -1.64
SPG11-220ENST00000559933 C19orf53Q9UNZ5 99 aaPredicted RBP4.82□□□□□ -1.64
SPG11-220ENST00000559933 MAPRE3Q9UPY8 281 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 L3MBTL1Q9Y468 752 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 CLCA3PQ9Y6N3 262 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 SPENQ96T58 3664 aaKnown RBP4.82□□□□□ -1.64
SPG11-220ENST00000559933 DMXL2Q8TDJ6 3036 aa4.82□□□□□ -1.64
SPG11-220ENST00000559933 APC2O95996 2303 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 LOC102723996A0A087X1L8 192 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 NSG1A0A0A6YYJ2 146 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 BLACEA4D250 179 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 ARGFXA6NJG6 315 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 CLDN24A6NM45 220 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 A8MVJ9 347 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 C21orf140B9A014 251 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 ACOT8O14734 319 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 ARPC2O15144 300 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 KLK10O43240 276 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 SLC28A2O43868 658 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 FCMRO60667 390 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 PRAMEF2O60811 474 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 COQ9O75208 318 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 CREG1O75629 220 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 H6PDO95479 791 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 NADKO95544 446 aaPredicted RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 MT-ND1P03886 318 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 ADRB1P08588 477 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 ALOX5P09917 674 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 GPX2P18283 190 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 ENDOUP21128 410 aaKnown RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 SDHBP21912 280 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 GABRA3P34903 492 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 EIF2S3P41091 472 aaKnown RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 NR0B1P51843 470 aaKnown RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 MNAT1P51948 309 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 DSTNP60981 165 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 PRR5P85299 388 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 PSG6Q00889 435 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 CCNIQ14094 377 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 SCARB2Q14108 478 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 KPNB1Q14974 876 aaKnown RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 NDUFAF6Q330K2 333 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 GLIPR1L2Q4G1C9 344 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 LRRC23Q53EV4 343 aaPredicted RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 SAMD4BQ5PRF9 694 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms