RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMAD6-204ENST00000559931 ZNF630Q2M218 657 aaPredicted RBP13.19□□□□□ -0.3
SMAD6-204ENST00000559931 FLYWCH1Q4VC44 716 aa13.19□□□□□ -0.3
SMAD6-204ENST00000559931 DESI1Q6ICB0 168 aa13.19□□□□□ -0.3
SMAD6-204ENST00000559931 REEP3Q6NUK4 255 aa13.19□□□□□ -0.3
SMAD6-204ENST00000559931 C8orf82Q6P1X6 216 aaPredicted RBP13.19□□□□□ -0.3
SMAD6-204ENST00000559931 LYPD8Q6UX82 237 aa13.19□□□□□ -0.3
SMAD6-204ENST00000559931 BNC2Q6ZN30 1099 aaPredicted RBP13.19□□□□□ -0.3
SMAD6-204ENST00000559931 RNF148Q8N7C7 305 aa13.19□□□□□ -0.3
SMAD6-204ENST00000559931 CATSPER1Q8NEC5 780 aa13.19□□□□□ -0.3
SMAD6-204ENST00000559931 OR2T12Q8NG77 320 aa13.19□□□□□ -0.3
SMAD6-204ENST00000559931 FAM110BQ8TC76 370 aa13.19□□□□□ -0.3
SMAD6-204ENST00000559931 TMEM19Q96HH6 336 aa13.19□□□□□ -0.3
SMAD6-204ENST00000559931 SPATA9Q9BWV2 254 aa13.19□□□□□ -0.3
SMAD6-204ENST00000559931 RNF32Q9H0A6 362 aa13.19□□□□□ -0.3
SMAD6-204ENST00000559931 METTL7AQ9H8H3 244 aa13.19□□□□□ -0.3
SMAD6-204ENST00000559931 CACYBPQ9HB71 228 aaKnown RBP13.19□□□□□ -0.3
SMAD6-204ENST00000559931 TAS2R1Q9NYW7 299 aa13.19□□□□□ -0.3
SMAD6-204ENST00000559931 RALYQ9UKM9 306 aaKnown RBP13.19□□□□□ -0.3
SMAD6-204ENST00000559931 EXPH5Q8NEV8 1989 aa13.19□□□□□ -0.3
SMAD6-204ENST00000559931 ATRXP46100 2492 aa13.19□□□□□ -0.3
SMAD6-204ENST00000559931 FAM208BQ5VWN6 2430 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 NPIPA5A0A0B4J1W7 369 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 PRAMEF27A3QJZ7 478 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 NPIPA7E9PJI5 369 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 K7EM74 188 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 FCMRO60667 390 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 DPM1O60762 260 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 NPIPA8P0DM63 369 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 ARAFP10398 606 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 CPOXP36551 454 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 CHRNEQ04844 493 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 RBBP4Q09028 425 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 ADRM1Q16186 407 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 GRAMD1BQ3KR37 738 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 LACTB2Q53H82 288 aaPredicted RBP13.18□□□□□ -0.3
SMAD6-204ENST00000559931 SAMD4BQ5PRF9 694 aaKnown RBP13.18□□□□□ -0.3
SMAD6-204ENST00000559931 ERICH5Q6P6B1 374 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 IGFL2Q6UWQ7 119 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 IGFL3Q6UXB1 125 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 LRRC74BQ6ZQY2 392 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 MDGA2Q7Z553 956 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 ZAR1Q86SH2 424 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 ZZZ3Q8IYH5 903 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 METTL25Q8N6Q8 603 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 ZNF614Q8N883 585 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 TTC9Q92623 222 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 REXO5Q96IC2 774 aaKnown RBP13.18□□□□□ -0.3
SMAD6-204ENST00000559931 ZNF583Q96ND8 569 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 SIGLEC12Q96PQ1 595 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 KCTD14Q9BQ13 255 aaPredicted RBP13.18□□□□□ -0.3
SMAD6-204ENST00000559931 BTBD10Q9BSF8 475 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 MFRPQ9BY79 579 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 HOXD1Q9GZZ0 328 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 C1orf21Q9H246 121 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 TMEM38AQ9H6F2 299 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 MTHFD2LQ9H903 347 aaPredicted RBP13.18□□□□□ -0.3
SMAD6-204ENST00000559931 KLHL1Q9NR64 748 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 POLE3Q9NRF9 147 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 UBQLN4Q9NRR5 601 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 SACM1LQ9NTJ5 587 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 KLRF1Q9NZS2 232 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 CNIH4Q9P003 139 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 TMEM181Q9P2C4 612 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 TUBD1Q9UJT1 453 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 PACSIN3Q9UKS6 424 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 ANGPT4Q9Y264 503 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.18□□□□□ -0.3
SMAD6-204ENST00000559931 IGSF10Q6WRI0 2623 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 CHD6Q8TD26 2715 aa13.18□□□□□ -0.3
SMAD6-204ENST00000559931 A0A0G2JPF8 293 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 ELOVL7A1L3X0 281 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 FAM220BPB1ANY3 271 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 HNRNPCL2B2RXH8 293 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 HNRNPCL3B7ZW38 293 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 G3V3Y1 287 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 SCDO00767 359 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 ICOSLGO75144 302 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 GMNNO75496 209 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 SLC25A12O75746 678 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 PDGFAP04085 211 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 SP1P08047 785 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 CHRM4P08173 479 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 HNRNPCL4P0DMR1 293 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 SFTPCP11686 197 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 TCN1P20061 433 aaPredicted RBP13.17□□□□□ -0.3
SMAD6-204ENST00000559931 AQP1P29972 269 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 LCN1P31025 176 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 GSK3BP49841 420 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 TNFSF10P50591 281 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 FUT5Q11128 374 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 VMACQ2NL98 169 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 DNAL1Q4LDG9 190 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 RPS26P11Q5JNZ5 115 aaPredicted RBP13.17□□□□□ -0.3
SMAD6-204ENST00000559931 PRAMEF20Q5VT98 475 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 TYW3Q6IPR3 259 aaKnown RBP13.17□□□□□ -0.3
SMAD6-204ENST00000559931 SLC25A25Q6KCM7 469 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 CALHM3Q86XJ0 350 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 KRT73Q86Y46 540 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 PTOV1Q86YD1 416 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms