RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 GRAMD1BQ3KR37 738 aa13.91□□□□□ -0.18
RPL28-207ENST00000558815 BEND6Q5SZJ8 279 aaPredicted RBP13.91□□□□□ -0.18
RPL28-207ENST00000558815 MFSD12Q6NUT3 480 aa13.91□□□□□ -0.18
RPL28-207ENST00000558815 FIGNL1Q6PIW4 674 aa13.91□□□□□ -0.18
RPL28-207ENST00000558815 GDF7Q7Z4P5 450 aa13.91□□□□□ -0.18
RPL28-207ENST00000558815 MARCH3Q86UD3 253 aa13.91□□□□□ -0.18
RPL28-207ENST00000558815 LIX1LQ8IVB5 337 aa13.91□□□□□ -0.18
RPL28-207ENST00000558815 TRIM42Q8IWZ5 723 aa13.91□□□□□ -0.18
RPL28-207ENST00000558815 COX18Q8N8Q8 333 aa13.91□□□□□ -0.18
RPL28-207ENST00000558815 SLC16A11Q8NCK7 471 aa13.91□□□□□ -0.18
RPL28-207ENST00000558815 FAM120BQ96EK7 910 aaKnown RBP13.91□□□□□ -0.18
RPL28-207ENST00000558815 DTNBP1Q96EV8 351 aa13.91□□□□□ -0.18
RPL28-207ENST00000558815 GIMAP5Q96F15 307 aa13.91□□□□□ -0.18
RPL28-207ENST00000558815 PRPF18Q99633 342 aaKnown RBP13.91□□□□□ -0.18
RPL28-207ENST00000558815 TBL1XR1Q9BZK7 514 aa13.91□□□□□ -0.18
RPL28-207ENST00000558815 PRDM14Q9GZV8 571 aa13.91□□□□□ -0.18
RPL28-207ENST00000558815 MED11Q9P086 117 aa13.91□□□□□ -0.18
RPL28-207ENST00000558815 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.91□□□□□ -0.18
RPL28-207ENST00000558815 PCDHGB3Q9Y5G1 929 aa13.91□□□□□ -0.18
RPL28-207ENST00000558815 TTC36A6NLP5 189 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 B4DXG7 233 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 FAM47E-STBD1D6RA91 191 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 H0Y3Z8 333 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 TOXO94900 526 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 ACTL6AO96019 429 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 ALOX5P09917 674 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 WDR4P57081 412 aaKnown RBP13.9□□□□□ -0.18
RPL28-207ENST00000558815 TP53BP2Q13625 1128 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 RCAN2Q14206 197 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 LASP1Q14847 261 aaKnown RBP13.9□□□□□ -0.18
RPL28-207ENST00000558815 NHSL2Q5HYW2 709 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 CCNJQ5T5M9 372 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 RIPPLY2Q5TAB7 128 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 ENPP6Q6UWR7 440 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 SEM1Q6ZVN7 128 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 GATSQ8NAP1 163 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 TNIP2Q8NFZ5 429 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 OR2M3Q8NG83 312 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 RNF138Q8WVD3 245 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 OR5P2Q8WZ92 322 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 DUSP26Q9BV47 211 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 RTN4RQ9BZR6 473 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 CXorf36Q9H7Y0 433 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 NPDC1Q9NQX5 325 aaPredicted RBP13.9□□□□□ -0.18
RPL28-207ENST00000558815 SDHAF3Q9NRP4 125 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 FAM120CQ9NX05 1096 aaKnown RBP13.9□□□□□ -0.18
RPL28-207ENST00000558815 ABCG2Q9UNQ0 655 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 MED12Q93074 2177 aa13.9□□□□□ -0.18
RPL28-207ENST00000558815 EPPINO95925 133 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 IL2RAP01589 272 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 HMGN2P05204 90 aaKnown RBP13.89□□□□□ -0.19
RPL28-207ENST00000558815 KITP10721 976 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 HK1P19367 917 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 CCT3P49368 545 aaKnown RBP13.89□□□□□ -0.19
RPL28-207ENST00000558815 DIO3P55073 304 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 CLDN8P56748 225 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 MLC1Q15049 377 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 LSM12Q3MHD2 195 aaKnown RBP13.89□□□□□ -0.19
RPL28-207ENST00000558815 RAET1LQ5VY80 246 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 AAGABQ6PD74 315 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 PLXDC2Q6UX71 529 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 LACC1Q8IV20 430 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 RIMKLAQ8IXN7 391 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 NAXEQ8NCW5 288 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 OR5M1Q8NGP8 315 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 OR5AK3PQ8NH89 298 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 DUSP19Q8WTR2 217 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 CDS1Q92903 461 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 COQ8BQ96D53 544 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 DPY30Q9C005 99 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 BHLHE41Q9C0J9 482 aaPredicted RBP13.89□□□□□ -0.19
RPL28-207ENST00000558815 TMBIM4Q9HC24 238 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 NKIRAS1Q9NYS0 192 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 NTMQ9P121 344 aa13.89□□□□□ -0.19
RPL28-207ENST00000558815 MARCOQ9UEW3 520 aaPredicted RBP13.89□□□□□ -0.19
RPL28-207ENST00000558815 CENPEQ02224 2701 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 HSPB2A8KAH6 182 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 KCNK2O95069 426 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 SNUPNO95149 360 aaKnown RBP13.88□□□□□ -0.19
RPL28-207ENST00000558815 OXSR1O95747 527 aaPredicted RBP13.88□□□□□ -0.19
RPL28-207ENST00000558815 ANGPTL1O95841 491 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 BMP5P22003 454 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 MAP3K8P41279 467 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 AGFG1P52594 562 aaKnown RBP13.88□□□□□ -0.19
RPL28-207ENST00000558815 GFRA1P56159 465 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 DSCR4P56555 118 aaPredicted RBP13.88□□□□□ -0.19
RPL28-207ENST00000558815 POU6F2P78424 691 aaPredicted RBP13.88□□□□□ -0.19
RPL28-207ENST00000558815 TFF3Q07654 80 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 CASP8Q14790 479 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 SF3B4Q15427 424 aaKnown RBP eCLIP13.88□□□□□ -0.199e-8■■■□□ 14.8
RPL28-207ENST00000558815 HSPB2Q16082 182 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 OR4F3Q6IEY1 312 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 APOOLQ6UXV4 268 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 ZAR1Q86SH2 424 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 UBQLNLQ8IYU4 475 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 CLECL1Q8IZS7 167 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 KIRREL3Q8IZU9 778 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 NATD1Q8N6N6 113 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 FADS6Q8N9I5 356 aa13.88□□□□□ -0.19
RPL28-207ENST00000558815 OR56A1Q8NGH5 318 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms