RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 OR5D16Q8NGK9 328 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 GOT1L1Q8NHS2 421 aaPredicted RBP11.29□□□□□ -0.6
SMAD3-205ENST00000558428 FAM110BQ8TC76 370 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 RNF138Q8WVD3 245 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 VPS33AQ96AX1 596 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 NTNG2Q96CW9 530 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 GNRHR2Q96P88 292 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 G6PC3Q9BUM1 346 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 TMEM120AQ9BXJ8 343 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 EXO5Q9H790 373 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 RMND5AQ9H871 391 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 PLSCR2Q9NRY7 297 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 GIN1Q9NXP7 522 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 QPCTLQ9NXS2 382 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 CCDC167Q9P0B6 97 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 SH3BGRL2Q9UJC5 107 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 TRIM33Q9UPN9 1127 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 C15orf41Q9Y2V0 281 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 PCDHGB3Q9Y5G1 929 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 KCNE3Q9Y6H6 103 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 USP9XQ93008 2570 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-205ENST00000558428 LRRK2Q5S007 2527 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 TRGV5A0A0B4J1U4 118 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 TRGV8A0A0C4DH27 118 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 DUXAA6NLW8 204 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 NR5A2O00482 541 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 AGFG2O95081 481 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 ANP32DO95626 131 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 IGHG3P01860 377 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 GSNP06396 782 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 ATP6V1C1P21283 382 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 PTPN6P29350 595 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 PTGS2P35354 604 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 GAS1P54826 345 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 CASP6P55212 293 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 IRX1P78414 480 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-205ENST00000558428 SRSF1Q07955 248 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMAD3-205ENST00000558428 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.28□□□□□ -0.6
SMAD3-205ENST00000558428 GRAMD1BQ3KR37 738 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 AGKQ53H12 422 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 C6orf10Q5SRN2 563 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 DCST2Q5T1A1 773 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 SAXO2Q658L1 398 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 OR5M10Q6IEU7 315 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 CGB2Q6NT52 195 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 TNFAIP8L2Q6P589 184 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-205ENST00000558428 DNAJC14Q6Y2X3 702 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-205ENST00000558428 TRILQ7L0X0 811 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 FGD2Q7Z6J4 655 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 ZAR1Q86SH2 424 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 FUNDC1Q8IVP5 155 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 FAM26EQ8N5C1 309 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 NEURL3Q96EH8 262 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 ITCHQ96J02 903 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 TBL1XR1Q9BZK7 514 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 SLC6A15Q9H2J7 730 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 OR51I1Q9H343 314 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 UBQLN3Q9H347 655 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 SERHL2Q9H4I8 314 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 RABEP2Q9H5N1 569 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 SERHLQ9NQF3 203 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 FBXO34Q9NWN3 711 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 PPP4R1LQ9P1A2 415 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 ABCG2Q9UNQ0 655 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 ZNF835Q9Y2P0 537 aa11.28□□□□□ -0.6
SMAD3-205ENST00000558428 A0A1B0GVC2 190 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 LRRTM2O43300 516 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 SUSD5O60279 629 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 HCN1O60741 890 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 SEMA7AO75326 666 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 CBR3O75828 277 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 OXSR1O95747 527 aaPredicted RBP11.27□□□□□ -0.61
SMAD3-205ENST00000558428 TPOP07202 933 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 OR12D1P0DN82 309 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 HPGDP15428 266 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 LCN1P31025 176 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 TRPC1P48995 793 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 KHKP50053 298 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 ARFIP2P53365 341 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 STX5Q13190 355 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 RCAN2Q14206 197 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 C3AR1Q16581 482 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 C4orf17Q53FE4 359 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 BLOC1S3Q6QNY0 202 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 Q6ZPB1 254 aaPredicted RBP11.27□□□□□ -0.61
SMAD3-205ENST00000558428 MARCH3Q86UD3 253 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 FJX1Q86VR8 437 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 PLCZ1Q86YW0 608 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 CHERPQ8IWX8 916 aaKnown RBP11.27□□□□□ -0.61
SMAD3-205ENST00000558428 WDSUB1Q8N9V3 476 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 MIPOL1Q8TD10 442 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 SPDL1Q96EA4 605 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 RTN4RQ9BZR6 473 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 ACKR4Q9NPB9 350 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 SDHAF3Q9NRP4 125 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 EXD2Q9NVH0 621 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 ERRFI1Q9UJM3 462 aaPredicted RBP11.27□□□□□ -0.61
SMAD3-205ENST00000558428 TINAGQ9UJW2 476 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 SLC5A6Q9Y289 635 aa11.27□□□□□ -0.61
SMAD3-205ENST00000558428 HRH3Q9Y5N1 445 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms