RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 C3orf14Q9HBI5 128 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 FAM120CQ9NX05 1096 aaKnown RBP14.35□□□□□ -0.11
TUBB3-213ENST00000557262 FLRT3Q9NZU0 649 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 EIF3LQ9Y262 564 aaKnown RBP14.35□□□□□ -0.11
TUBB3-213ENST00000557262 MED12LQ86YW9 2145 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 NIPBLQ6KC79 2804 aaeCLIP14.34□□□□□ -0.11
TUBB3-213ENST00000557262 SMNDC1O75940 238 aaKnown RBP eCLIP14.34□□□□□ -0.11
TUBB3-213ENST00000557262 IFI6P09912 130 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 UROSP10746 265 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 CRHR1P34998 444 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 SUCLG1P53597 346 aaKnown RBP14.34□□□□□ -0.11
TUBB3-213ENST00000557262 CLDN15P56746 228 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 FAM27E3Q08E93 113 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 KIAA0040Q15053 153 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 RAET1LQ5VY80 246 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 IKBIPQ70UQ0 350 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 MARCH3Q86UD3 253 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 PGM2Q96G03 612 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 EGLN2Q96KS0 407 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 PIGQQ9BRB3 760 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 RTN4RQ9BZR6 473 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 NEUROD4Q9HD90 331 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 DLL4Q9NR61 685 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 OXSMQ9NWU1 459 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 CCL27Q9Y4X3 112 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 VPS13CQ709C8 3753 aa14.34□□□□□ -0.11
TUBB3-213ENST00000557262 SLC28A1O00337 649 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 PLIN3O60664 434 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 CPA3P15088 417 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 GABRA3P34903 492 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 CPOXP36551 454 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 CD79BP40259 229 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 KIR2DL2P43627 348 aaPredicted RBP14.33□□□□□ -0.12
TUBB3-213ENST00000557262 RFX3P48380 749 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 C17orf67Q0P5P2 114 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 STX5Q13190 355 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 VWA1Q6PCB0 445 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 BTLAQ7Z6A9 289 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 CNEP1R1Q8N9A8 125 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 FIG4Q92562 907 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 WFIKKN1Q96NZ8 548 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 PINK1Q9BXM7 581 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 TNFRSF12AQ9NP84 129 aa14.33□□□□□ -0.12
TUBB3-213ENST00000557262 A0A1W2PPR1 153 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 OR2M5A3KFT3 312 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 NPIPB8E9PQR5 432 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 H0YC42 278 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 EMC8O43402 210 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 KCNH1O95259 989 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 UTS2O95399 124 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 PRPS2P11908 318 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 CD53P19397 219 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 PRPH2P23942 346 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 HOXC12P31275 282 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 TPD52P55327 224 aaPredicted RBP14.32□□□□□ -0.12
TUBB3-213ENST00000557262 RPS3AP61247 264 aaKnown RBP14.32□□□□□ -0.12
TUBB3-213ENST00000557262 PRR5P85299 388 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 OCRLQ01968 901 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 ZNF474Q6S9Z5 364 aaPredicted RBP14.32□□□□□ -0.12
TUBB3-213ENST00000557262 ZNF551Q7Z340 670 aaPredicted RBP14.32□□□□□ -0.12
TUBB3-213ENST00000557262 CCDC63Q8NA47 563 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 OR5M1Q8NGP8 315 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 C1GALT1C1Q96EU7 318 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 FAM111AQ96PZ2 611 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 SLC39A3Q9BRY0 314 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 TBL1XR1Q9BZK7 514 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 IQCGQ9H095 443 aaKnown RBP14.32□□□□□ -0.12
TUBB3-213ENST00000557262 GSX1Q9H4S2 264 aaPredicted RBP14.32□□□□□ -0.12
TUBB3-213ENST00000557262 BEX4Q9NWD9 120 aaPredicted RBP14.32□□□□□ -0.12
TUBB3-213ENST00000557262 C1orf109Q9NX04 203 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 ELOVL5Q9NYP7 299 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 ZNF175Q9Y473 711 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 TESMINQ9Y4I5 508 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 AP4B1Q9Y6B7 739 aa14.32□□□□□ -0.12
TUBB3-213ENST00000557262 IGLV3-32A0A0A0MS00 114 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 GXYLT2A0PJZ3 443 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 H3BML4 177 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 SEC14L5O43304 696 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 CTIFO43310 598 aaKnown RBP14.31□□□□□ -0.12
TUBB3-213ENST00000557262 RGS14O43566 566 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 ANGPTL1O95841 491 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 CGAP01215 116 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 CLDN20P56880 219 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 FGFBP1Q14512 234 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 VPS26BQ4G0F5 336 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 CLEC6AQ6EIG7 209 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 APOOLQ6UXV4 268 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 Q6ZSR9 355 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 TDRPQ86YL5 185 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 WFDC11Q8NEX6 87 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 CEP70Q8NHQ1 597 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 GPR151Q8TDV0 419 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 GFM2Q969S9 779 aaKnown RBP14.31□□□□□ -0.12
TUBB3-213ENST00000557262 ZNF845Q96IR2 970 aaPredicted RBP14.31□□□□□ -0.12
TUBB3-213ENST00000557262 OPN3Q9H1Y3 402 aaPredicted RBP14.31□□□□□ -0.12
TUBB3-213ENST00000557262 C12orf65Q9H3J6 166 aaKnown RBP14.31□□□□□ -0.12
TUBB3-213ENST00000557262 RNF122Q9H9V4 155 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 PPCSQ9HAB8 311 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 LRTM1Q9HBL6 345 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 HHATLQ9HCP6 504 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms