RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PNLIPP16233 465 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 IL7RP16871 459 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 GABRB1P18505 474 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 S1PR1P21453 382 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 NT5EP21589 574 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 RPS4Y1P22090 263 aaKnown RBP7.72□□□□□ -1.17
ATXN3-235ENST00000556082 PAX7P23759 505 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 EEF1B2P24534 225 aaKnown RBP7.72□□□□□ -1.17
ATXN3-235ENST00000556082 ELAVL4P26378 380 aaKnown RBP7.72□□□□□ -1.17
ATXN3-235ENST00000556082 ACVR2AP27037 513 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 DCKP27707 260 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 IFNA8P32881 189 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 AVPR1BP47901 424 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 FNTBP49356 437 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 HSD17B7P56937 341 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 SLC35A2P78381 396 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 HSD11B2P80365 405 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 HPCAP84074 193 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 MVKQ03426 396 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 PMS2P3Q13401 168 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 LSAMPQ13449 338 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 GRM7Q14831 915 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 DUSP5Q16690 384 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 ZSWIM7Q19AV6 140 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 DEFB133Q30KQ1 61 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 CYP27C1Q4G0S4 372 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 TRMT12Q53H54 448 aaKnown RBP7.72□□□□□ -1.17
ATXN3-235ENST00000556082 ZNF311Q5JNZ3 666 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 YOD1Q5VVQ6 348 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-235ENST00000556082 GTF2IRD2BQ6EKJ0 949 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 XAF1Q6GPH4 301 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 TYW3Q6IPR3 259 aaKnown RBP7.72□□□□□ -1.17
ATXN3-235ENST00000556082 WDR74Q6RFH5 385 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-235ENST00000556082 FRRS1Q6ZNA5 592 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 B3GNT8Q7Z7M8 397 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 GTF2IRD2Q86UP8 949 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 COMTD1Q86VU5 262 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 PLXDC1Q8IUK5 500 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 TAGAPQ8N103 731 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 GALNT15Q8N3T1 639 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 AQP11Q8NBQ7 271 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 TMEM52Q8NDY8 209 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 OR5T3Q8NGG3 340 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 OR6T1Q8NGN1 323 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 OR13F1Q8NGS4 319 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 OR52P1PQ8NH57 321 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 TRUB1Q8WWH5 349 aaKnown RBP7.72□□□□□ -1.17
ATXN3-235ENST00000556082 MVB12AQ96EY5 273 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 SIGLEC11Q96RL6 698 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 NIPSNAP1Q9BPW8 284 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 PELOQ9BRX2 385 aaKnown RBP7.72□□□□□ -1.17
ATXN3-235ENST00000556082 YIPF4Q9BSR8 244 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 LMF2Q9BU23 707 aaKnown RBP7.72□□□□□ -1.17
ATXN3-235ENST00000556082 UCK2Q9BZX2 261 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 ZNF350Q9GZX5 532 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 GSX1Q9H4S2 264 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-235ENST00000556082 STARD5Q9NSY2 213 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 UCKL1Q9NWZ5 548 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 KLHL28Q9NXS3 571 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 REV1Q9UBZ9 1251 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 FTSJ1Q9UET6 329 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 NDOR1Q9UHB4 597 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 SLC13A4Q9UKG4 626 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 RNF215Q9Y6U7 377 aa7.72□□□□□ -1.17
ATXN3-235ENST00000556082 SNRNP200O75643 2136 aaKnown RBP7.72□□□□□ -1.17
ATXN3-235ENST00000556082 A0A0A6YYC8 382 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 IGHV5-51A0A0C4DH38 117 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 A0A1B0GVT2 93 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 SH3D21A4FU49 640 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 H3BMH7 237 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 I3L1I5 382 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 NDUFB5O43674 189 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 KIF1CO43896 1103 aaKnown RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 FCMRO60667 390 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 FMO6PO60774 539 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 LDB3O75112 727 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 UGT2B17O75795 530 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 DBIP07108 87 aaKnown RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 DCNP07585 359 aaKnown RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 CTSBP07858 339 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 CYP4B1P13584 511 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 GNSP15586 552 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 GSTM3P21266 225 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 AGXTP21549 392 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 PTGER1P34995 402 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 IFNGR2P38484 337 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 ARRB1P49407 418 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 PDX1P52945 283 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 CRISP1P54107 249 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 TMBIM6P55061 237 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 SNRPGP62308 76 aaKnown RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 EEF1A1P68104 462 aaKnown RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 IL1RL1Q01638 556 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 DMWDQ09019 674 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 PIN1Q13526 163 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 SERTAD2Q14140 314 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 GANABQ14697 944 aaKnown RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 RAB39AQ14964 217 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 LARS2Q15031 903 aaKnown RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 TRAM2Q15035 370 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms