RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CEACAM20Q6UY09 585 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 C22orf34Q6ZV56 151 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 PIWIL3Q7Z3Z3 882 aaKnown RBP6.37□□□□□ -1.39
SLIRP-204ENST00000555890 ZNF761Q86XN6 746 aaPredicted RBP6.37□□□□□ -1.39
SLIRP-204ENST00000555890 ARMC8Q8IUR7 673 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 EPHX4Q8IUS5 362 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 SFTPA2Q8IWL1 248 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 OR4N4Q8N0Y3 316 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 CISD2Q8N5K1 135 aaKnown RBP6.37□□□□□ -1.39
SLIRP-204ENST00000555890 CSNK1A1LQ8N752 337 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 FAM86B1Q8N7N1 296 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 ZNF555Q8NEP9 628 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 OR4K14Q8NGD5 310 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 OR56A1Q8NGH5 318 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 OR2T29Q8NH02 315 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 ZCCHC10Q8TBK6 192 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 SPPL2AQ8TCT8 520 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 RASSF5Q8WWW0 418 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 MAL2Q969L2 176 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 TBC1D20Q96BZ9 403 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 ZDHHC12Q96GR4 267 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 TCTN2Q96GX1 697 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 SLC35G5Q96KT7 338 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 RDH12Q96NR8 316 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 TRAPPC9Q96Q05 1148 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 ZNF347Q96SE7 839 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 MAPKAP1Q9BPZ7 522 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 RBM4BQ9BQ04 359 aaKnown RBP6.37□□□□□ -1.39
SLIRP-204ENST00000555890 SPATA5L1Q9BVQ7 753 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 RBM4Q9BWF3 364 aaKnown RBP6.37□□□□□ -1.39
SLIRP-204ENST00000555890 EPB41L1Q9H4G0 881 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 GLIPR2Q9H4G4 154 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 ERVMER34-1Q9H9K5 563 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 NTN4Q9HB63 628 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 ANKHQ9HCJ1 492 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 A4GALTQ9NPC4 353 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 IL1RAPQ9NPH3 570 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 SLAMF7Q9NQ25 335 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 SIRT3Q9NTG7 399 aaPredicted RBP6.37□□□□□ -1.39
SLIRP-204ENST00000555890 ZCCHC3Q9NUD5 404 aaKnown RBP6.37□□□□□ -1.39
SLIRP-204ENST00000555890 H2AFY2Q9P0M6 372 aaPredicted RBP6.37□□□□□ -1.39
SLIRP-204ENST00000555890 C5AR2Q9P296 337 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 TRPC4Q9UBN4 977 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 EPHA6Q9UF33 1036 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 ACSL6Q9UKU0 697 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 CES1P1Q9UKY3 287 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 ORC6Q9Y5N6 252 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 SLC22A7Q9Y694 548 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 CSNK1G3Q9Y6M4 447 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 VPS13CQ709C8 3753 aa6.37□□□□□ -1.39
SLIRP-204ENST00000555890 SHISA3A0PJX4 238 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 SLC9B1P1A6NJY1 282 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 H0YAE9 185 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 UPK1AO00322 258 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 P2RX6O15547 441 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 DPM1O60762 260 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 SERPINB7O75635 380 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 TNFAIP8O95379 198 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 BMP10O95393 424 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 AGR2O95994 175 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 FHP07954 510 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 TFPTP0C1Z6 253 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 THRBP10828 461 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 CDK4P11802 303 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 ST6GAL1P15907 406 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 MATN1P21941 496 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 AQP1P29972 269 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 FEN1P39748 380 aaKnown RBP6.36□□□□□ -1.39
SLIRP-204ENST00000555890 CAPGP40121 348 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 GRK6P43250 576 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 HTR3AP46098 478 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 CAPZBP47756 277 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 ARRB1P49407 418 aaPredicted RBP6.36□□□□□ -1.39
SLIRP-204ENST00000555890 PRKAG1P54619 331 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 RAD23AP54725 363 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 ARSFP54793 590 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 CASP9P55211 416 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 LIM2P55344 173 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 EEF1A2Q05639 463 aaKnown RBP6.36□□□□□ -1.39
SLIRP-204ENST00000555890 RUNX2Q13950 521 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 ODF1Q14990 250 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 SHBQ15464 509 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 CEBPEQ15744 281 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 DEFB133Q30KQ1 61 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 RFX4Q33E94 735 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 NHSL2Q5HYW2 709 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 OTUD3Q5T2D3 398 aaPredicted RBP6.36□□□□□ -1.39
SLIRP-204ENST00000555890 HES3Q5TGS1 186 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 TTC23Q5W5X9 447 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 FRMPD2BQ6IN97 320 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 FAM180BQ6P0A1 224 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 TNFAIP8L2Q6P589 184 aaPredicted RBP6.36□□□□□ -1.39
SLIRP-204ENST00000555890 SHQ1Q6PI26 577 aaKnown RBP6.36□□□□□ -1.39
SLIRP-204ENST00000555890 Q6ZS46 218 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 SZRD1Q7Z422 152 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 CARM1Q86X55 608 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 C17orf82Q86X59 251 aaPredicted RBP6.36□□□□□ -1.39
SLIRP-204ENST00000555890 KRT73Q86Y46 540 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 CHERPQ8IWX8 916 aaKnown RBP6.36□□□□□ -1.39
SLIRP-204ENST00000555890 CARFQ8N187 725 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms