RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ETS2P15036 469 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 ME2P23368 584 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 PCGF2P35227 344 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 PGM1P36871 562 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 CD96P40200 585 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 CLK3P49761 638 aaKnown RBP11.47□□□□□ -0.57
SHMT2-221ENST00000555773 ATP12AP54707 1039 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 OC90Q02509 493 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-221ENST00000555773 CHRNEQ04844 493 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 FUT5Q11128 374 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 RAPSNQ13702 412 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 CEACAM7Q14002 265 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 MAPK11Q15759 364 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 CCNJQ5T5M9 372 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 PGM2L1Q6PCE3 622 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 IGFL3Q6UXB1 125 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 IL20RBQ6UXL0 311 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 RTL4Q6ZR62 310 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 CCDC80Q76M96 950 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 KRT73Q86Y46 540 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 PRR22Q8IZ63 422 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 FBXW8Q8N3Y1 598 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 GOLM1Q8NBJ4 401 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 NFKBIDQ8NI38 313 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 HGDQ93099 445 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 MCUR1Q96AQ8 359 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 EFHD2Q96C19 240 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-221ENST00000555773 ZNF607Q96SK3 696 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 TREX2Q9BQ50 279 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-221ENST00000555773 SPATA5L1Q9BVQ7 753 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 CADM1Q9BY67 442 aaKnown RBP11.47□□□□□ -0.57
SHMT2-221ENST00000555773 SLC38A1Q9H2H9 487 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 HHATLQ9HCP6 504 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 UBQLN4Q9NRR5 601 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 FBXO34Q9NWN3 711 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 CNIH4Q9P003 139 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 SUCOQ9UBS9 1254 aaKnown RBP11.47□□□□□ -0.57
SHMT2-221ENST00000555773 TUBD1Q9UJT1 453 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 PCDHGA10Q9Y5H3 936 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.47□□□□□ -0.57
SHMT2-221ENST00000555773 MED13Q9UHV7 2174 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 ANKRD33BA6NCL7 494 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 OR5H15A6NDH6 313 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 KIAA0513O60268 411 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 UGT2B11O75310 529 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 SERPINB7O75635 380 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 UTS2O95399 124 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 IFNA14P01570 189 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 CHRM4P08173 479 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 CYP4B1P13584 511 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 ENDOUP21128 410 aaKnown RBP11.46□□□□□ -0.57
SHMT2-221ENST00000555773 TBXA2RP21731 343 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 RFX3P48380 749 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 POLE2P56282 527 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 FBXW4P57775 412 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 RHDQ02161 417 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 BNIP2Q12982 314 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 SNTA1Q13424 505 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 TUBA3CQ13748 450 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 ZNF141Q15928 474 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 FXNQ16595 210 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 FLYWCH1Q4VC44 716 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 ZNF468Q5VIY5 522 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-221ENST00000555773 SLC22A10Q63ZE4 541 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 TYW3Q6IPR3 259 aaKnown RBP11.46□□□□□ -0.57
SHMT2-221ENST00000555773 TMEM81Q6P7N7 255 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 TUBA3EQ6PEY2 450 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 FRRS1Q6ZNA5 592 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 PATL1Q86TB9 770 aaKnown RBP11.46□□□□□ -0.57
SHMT2-221ENST00000555773 PTRH1Q86Y79 214 aaKnown RBP11.46□□□□□ -0.57
SHMT2-221ENST00000555773 CYP4Z2PQ8N1L4 340 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 ZNF619Q8N2I2 560 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 ZADH2Q8N4Q0 377 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 ZNF527Q8NB42 609 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 SPPL2AQ8TCT8 520 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 PAQR8Q8TEZ7 354 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 EXTL1Q92935 676 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 ADNPQ9H2P0 1102 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 CACYBPQ9HB71 228 aaKnown RBP11.46□□□□□ -0.57
SHMT2-221ENST00000555773 SH2D2AQ9NP31 389 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 TIMMDC1Q9NPL8 285 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 LRFN1Q9P244 771 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 MKLN1Q9UL63 735 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 ABCG2Q9UNQ0 655 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 ZNF232Q9UNY5 417 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 IFT52Q9Y366 437 aa11.46□□□□□ -0.57
SHMT2-221ENST00000555773 CNTRLQ7Z7A1 2325 aa11.46□□□□□ -0.58
SHMT2-221ENST00000555773 DSPPQ9NZW4 1301 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 AGAP5A6NIR3 686 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 NPIPB9F8W1W9 429 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 M0QX08 132 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 FADS1O60427 444 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 DBIP07108 87 aaKnown RBP11.45□□□□□ -0.58
SHMT2-221ENST00000555773 HPGDP15428 266 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 KDELR2P33947 212 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 PCBP3P57721 371 aaKnown RBP11.45□□□□□ -0.58
SHMT2-221ENST00000555773 ARG2P78540 354 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 ELOAQ14241 798 aaKnown RBP11.45□□□□□ -0.58
SHMT2-221ENST00000555773 TRIM25Q14258 630 aaKnown RBP11.45□□□□□ -0.58
SHMT2-221ENST00000555773 GPR68Q15743 365 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms