RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 PDLIM4P50479 330 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 EFNA4P52798 201 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 PPP5CP53041 499 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 PIGFQ07326 219 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 SRSF4Q08170 494 aaKnown RBP4.99□□□□□ -1.61
NEK9-207ENST00000555763 PPIDQ08752 370 aaKnown RBP4.99□□□□□ -1.61
NEK9-207ENST00000555763 RAB35Q15286 201 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 ZSWIM7Q19AV6 140 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 DEPDC1Q5TB30 811 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 PRAMEF20Q5VT98 475 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 AGAP6Q5VW22 663 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 PLBD1Q6P4A8 553 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 STAC2Q6ZMT1 411 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 KIAA1328Q86T90 577 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 SLC22A15Q8IZD6 547 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 PTGR2Q8N8N7 351 aaPredicted RBP4.99□□□□□ -1.61
NEK9-207ENST00000555763 CNEP1R1Q8N9A8 125 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 SYT14Q8NB59 555 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 OR5T3Q8NGG3 340 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 SPATA22Q8NHS9 363 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 ELMO1Q92556 727 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 ABTB1Q969K4 478 aaPredicted RBP4.99□□□□□ -1.61
NEK9-207ENST00000555763 ZNF597Q96LX8 424 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 KRT12Q99456 494 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 CITED1Q99966 193 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 RBM4BQ9BQ04 359 aaKnown RBP4.99□□□□□ -1.61
NEK9-207ENST00000555763 CCDC77Q9BR77 488 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 SLC25A51Q9H1U9 297 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 CDC42EP4Q9H3Q1 356 aaKnown RBP4.99□□□□□ -1.61
NEK9-207ENST00000555763 NDST4Q9H3R1 872 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 CBLN4Q9NTU7 201 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 PPP1R14DQ9NXH3 145 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 PCYOX1Q9UHG3 505 aa4.99□□□□□ -1.61
NEK9-207ENST00000555763 LOC285095A0A1B0GVY8 99 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 A0A1W2PQ09 198 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 LRP5LA4QPB2 252 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 KRT87PA6NCN2 255 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 ZNF860A6NHJ4 632 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 AGAP5A6NIR3 686 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 FAM90A7PA6NKC0 464 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 SH2D7A6NKC9 451 aaPredicted RBP4.98□□□□□ -1.61
NEK9-207ENST00000555763 FAM90A22PA8MWA6 464 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 FAM90A12PA8MX19 464 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 FAM90A23PA8MXZ1 464 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 F8VZ95 297 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 C3orf84H3BNL1 204 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 GOLGA8MH3BSY2 632 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 TIMM23O14925 209 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 STX7O15400 261 aaKnown RBP4.98□□□□□ -1.61
NEK9-207ENST00000555763 HOXA3O43365 443 aaPredicted RBP4.98□□□□□ -1.61
NEK9-207ENST00000555763 EMC8O43402 210 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 TRIM3O75382 744 aaPredicted RBP4.98□□□□□ -1.61
NEK9-207ENST00000555763 GPC4O75487 556 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 PDE5AO76074 875 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 AP2A2O94973 939 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 TGDSO95455 350 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 TSPAN15O95858 294 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 ACTL6AO96019 429 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 PTMAP06454 111 aaKnown RBP4.98□□□□□ -1.61
NEK9-207ENST00000555763 CD48P09326 243 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 PKMP14618 531 aaKnown RBP4.98□□□□□ -1.61
NEK9-207ENST00000555763 CHN1P15882 459 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 PTNP21246 168 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 MAOAP21397 527 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 MDKP21741 143 aaPredicted RBP4.98□□□□□ -1.61
NEK9-207ENST00000555763 ACRV1P26436 265 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 THBS4P35443 961 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 PPARGP37231 505 aaPredicted RBP4.98□□□□□ -1.61
NEK9-207ENST00000555763 NAGLUP54802 743 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 BTG2P78543 158 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 PLOD1Q02809 727 aaPredicted RBP4.98□□□□□ -1.61
NEK9-207ENST00000555763 GUSBP1Q15486 140 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 MED22Q15528 200 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 FAM189A2Q15884 450 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 ZNF791Q3KP31 576 aaPredicted RBP4.98□□□□□ -1.61
NEK9-207ENST00000555763 EIPR1Q53HC9 387 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 SIRPB2Q5JXA9 342 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 ZNF362Q5T0B9 420 aaPredicted RBP4.98□□□□□ -1.61
NEK9-207ENST00000555763 FAM182AQ5T1J6 154 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 SLC22A10Q63ZE4 541 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 DCUN1D2Q6PH85 259 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 OPN5Q6U736 354 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 TMEM108Q6UXF1 575 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 SNX20Q7Z614 316 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 ATG4DQ86TL0 474 aaPredicted RBP4.98□□□□□ -1.61
NEK9-207ENST00000555763 LDB1Q86U70 411 aaPredicted RBP4.98□□□□□ -1.61
NEK9-207ENST00000555763 GRAMD2AQ8IUY3 354 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 SPC24Q8NBT2 197 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 ZFP28Q8NHY6 868 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 BLOC1S5Q8TDH9 187 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 KCTD4Q8WVF5 259 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 TFAP2CQ92754 450 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 ZNF764Q96H86 408 aaPredicted RBP4.98□□□□□ -1.61
NEK9-207ENST00000555763 AJUBAQ96IF1 538 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 ZNF845Q96IR2 970 aaPredicted RBP4.98□□□□□ -1.61
NEK9-207ENST00000555763 ERGIC2Q96RQ1 377 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 PCDHB18PQ96TA0 734 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 SLC6A7Q99884 636 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 BPESC1Q9GZL8 116 aa4.98□□□□□ -1.61
NEK9-207ENST00000555763 ACTR6Q9GZN1 396 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms