RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 TMEM163Q8TC26 289 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 GANCQ8TET4 914 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 SLC38A2Q96QD8 506 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 TMEM43Q9BTV4 400 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 FAIM2Q9BWQ8 316 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 TNFRSF10DQ9UBN6 386 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 NCKAP1Q9Y2A7 1128 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 NDUFS4O43181 175 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 GRPRP30550 384 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 MMP12P39900 470 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 GCGRP47871 477 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 KLHL22Q53GT1 634 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 CCDC28AQ8IWP9 274 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 TCEAL8Q8IYN2 117 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 FAM109AQ8N4B1 249 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 CLDN22Q8N7P3 220 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 MORN4Q8NDC4 146 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 NUS1Q96E22 293 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 SGPP1Q9BX95 441 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 HMX1Q9NP08 348 aaPredicted RBP15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 NLGN3Q9NZ94 848 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 AHSPQ9NZD4 102 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 FOXE1O00358 373 aaPredicted RBP15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 PI15O43692 258 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 UBXN7O94888 489 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 OC90Q02509 493 aaPredicted RBP15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 CRYZQ08257 329 aaKnown RBP15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 NTRK2Q16620 822 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 GXYLT1Q4G148 440 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 C16orf62Q7Z3J2 963 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 UBE3DQ7Z6J8 389 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 AMDHD1Q96NU7 426 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 WDFY2Q96P53 400 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 SYNPO2LQ9H987 977 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 USP36Q9P275 1121 aaKnown RBP15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 KLHL42Q9P2K6 505 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 EIF3KQ9UBQ5 218 aaKnown RBP15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 SPATA2Q9UM82 520 aa15.98■□□□□ 0.15
PPP4R3A-208ENST00000555462 TSPAN4O14817 238 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 HOXA2O43364 376 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 PROS1P07225 676 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 ZNF30P17039 623 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 GAS1P54826 345 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 CLDN12P56749 244 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 ZNF155Q12901 538 aaPredicted RBP15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 RD3Q7Z3Z2 195 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 RFLNBQ8N5W9 214 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 ZNF655Q8N720 491 aaPredicted RBP15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 C17orf47Q8NEP4 570 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 OR11H7Q8NGC8 314 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 AKAP1Q92667 903 aaKnown RBP eCLIP15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 LRRC3BQ96PB8 259 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 ARHGAP9Q9BRR9 750 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 SSNA1O43805 119 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 PAICSP22234 425 aaKnown RBP15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 CST5P28325 142 aaPredicted RBP15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 PPP3R1P63098 170 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 TOR2AQ5JU69 321 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 LYPD4Q6UWN0 246 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 GDPGP1Q6ZNW5 385 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 CEACAM19Q7Z692 300 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 SLC16A11Q8NCK7 471 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 ZCCHC10Q8TBK6 192 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 GRHL3Q8TE85 626 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 CNRIP1Q96F85 164 aaPredicted RBP15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 AIF1LQ9BQI0 150 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 RETREG1Q9H6L5 497 aa15.97■□□□□ 0.15
PPP4R3A-208ENST00000555462 PRRT4C9JH25 899 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 DNAJB6O75190 326 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 NOS3P29474 1203 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 MAT2AP31153 395 aaKnown RBP15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 GABRA5P31644 462 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 DGCR2P98153 550 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 SRSF5Q13243 272 aaKnown RBP15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 OCLNQ16625 522 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 ENTPD8Q5MY95 495 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 SLC39A11Q8N1S5 342 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 KCT2Q8NC54 265 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 PFN4Q8NHR9 129 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 ARRDC3Q96B67 414 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 WDR89Q96FK6 387 aaPredicted RBP15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 MS4A8Q9BY19 250 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 GSDMCQ9BYG8 508 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 SLC7A7Q9UM01 511 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 PPIL1Q9Y3C6 166 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 TRAV27A0A087WT01 109 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 FAM171A2A8MVW0 826 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 SIGLEC5O15389 551 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 PRKNO60260 465 aaPredicted RBP15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 OLFM2O95897 454 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 ST8SIA6P61647 398 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 SIGLEC14Q08ET2 396 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 AMZ2Q86W34 360 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 MCHR1Q99705 422 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 AICDAQ9GZX7 198 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 SLC35C2Q9NQQ7 365 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 NANSQ9NR45 359 aa15.96■□□□□ 0.15
PPP4R3A-208ENST00000555462 LEUTXA8MZ59 168 aa15.96■□□□□ 0.14
PPP4R3A-208ENST00000555462 PAK4O96013 591 aaPredicted RBP15.96■□□□□ 0.14
PPP4R3A-208ENST00000555462 FGBP02675 491 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms