RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 HS6ST1O60243 411 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 NME6O75414 186 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-218ENST00000555213 OR6B1O95007 311 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 ALOX5P09917 674 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 FBXO45P0C2W1 286 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 ETFAP13804 333 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 NAGAP17050 411 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 PPIBP23284 216 aaKnown RBP10.05□□□□□ -0.8
SHMT2-218ENST00000555213 IL12BP29460 328 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 CD96P40200 585 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 MAN2A2P49641 1150 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 PSMD4P55036 377 aaKnown RBP10.05□□□□□ -0.8
SHMT2-218ENST00000555213 TXNL4AP83876 142 aaKnown RBP10.05□□□□□ -0.8
SHMT2-218ENST00000555213 LASP1Q14847 261 aaKnown RBP10.05□□□□□ -0.8
SHMT2-218ENST00000555213 DECR1Q16698 335 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 VMACQ2NL98 169 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 CYP27C1Q4G0S4 372 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 ZNF766Q5HY98 468 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 SLC44A2Q8IWA5 706 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-218ENST00000555213 AQP12AQ8IXF9 295 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 SLC34A3Q8N130 599 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 RBMXL3Q8N7X1 1067 aaKnown RBP10.05□□□□□ -0.8
SHMT2-218ENST00000555213 GOLM1Q8NBJ4 401 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 MDS2Q8NDY4 140 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 GPR151Q8TDV0 419 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 SLC9A6Q92581 669 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 MAL2Q969L2 176 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 C16orf58Q96GQ5 468 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 SLC35G5Q96KT7 338 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 LMF2Q9BU23 707 aaKnown RBP10.05□□□□□ -0.8
SHMT2-218ENST00000555213 DCLRE1BQ9H816 532 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 RNPEPL1Q9HAU8 725 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 KLF13Q9Y2Y9 288 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-218ENST00000555213 SNX13Q9Y5W8 968 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 NPFFR2Q9Y5X5 522 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 DUXAA6NLW8 204 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 CXCR6O00574 342 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 NME2P1O60361 137 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 FKBP6O75344 327 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 PPM1BO75688 479 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 NEURL1O76050 574 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 NADKO95544 446 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-218ENST00000555213 KRT75O95678 551 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 AGR2O95994 175 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 P04436 131 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 HMGN2P05204 90 aaKnown RBP10.04□□□□□ -0.8
SHMT2-218ENST00000555213 TFPTP0C1Z6 253 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 CT45A8P0DMV1 189 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 CT45A9P0DMV2 189 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 NME2P22392 152 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 ABCD3P28288 659 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 GABRA3P34903 492 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 GCKP35557 465 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 MAP3K8P41279 467 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 CD97P48960 835 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 KHKP50053 298 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 RPS26P62854 115 aaKnown RBP10.04□□□□□ -0.8
SHMT2-218ENST00000555213 EFR3AQ14156 821 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 NADK2Q4G0N4 442 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 CT45A2Q5DJT8 189 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 ZNF468Q5VIY5 522 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-218ENST00000555213 SPINK14Q6IE38 97 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 IL20RBQ6UXL0 311 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 ADGRG5Q8IZF4 528 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 LILRA2Q8N149 483 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 COX18Q8N8Q8 333 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 PAPD5Q8NDF8 572 aaKnown RBP10.04□□□□□ -0.8
SHMT2-218ENST00000555213 FBXO30Q8TB52 745 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 MIPOL1Q8TD10 442 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 SLC26A7Q8TE54 656 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 ADAMTS15Q8TE58 950 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 CANT1Q8WVQ1 401 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 NRG4Q8WWG1 115 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 OMA1Q96E52 524 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 STACQ99469 402 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 ACTRT3Q9BYD9 372 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 MUC13Q9H3R2 512 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 TMEM38AQ9H6F2 299 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 KLHL1Q9NR64 748 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 DUSP22Q9NRW4 184 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 SACM1LQ9NTJ5 587 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 CCM2LQ9NUG4 571 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-218ENST00000555213 STX18Q9P2W9 335 aaKnown RBP10.04□□□□□ -0.8
SHMT2-218ENST00000555213 CBLCQ9ULV8 474 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 PCDHGB6Q9Y5F9 930 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 KCNE3Q9Y6H6 103 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 SETXQ7Z333 2677 aaKnown RBP10.04□□□□□ -0.8
SHMT2-218ENST00000555213 CPAMD8Q8IZJ3 1885 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 DOCK10Q96BY6 2186 aa10.04□□□□□ -0.8
SHMT2-218ENST00000555213 PIEZO2Q9H5I5 2752 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 H0Y3Z8 333 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 KLRC4-KLRK1H3BQV0 150 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 HMGN4O00479 90 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 REM1O75628 298 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 SP1P08047 785 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 ANPEPP15144 967 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 SLC7A1P30825 629 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 KDELR2P33947 212 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 CRATP43155 626 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 MAGEA8P43361 318 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms