RNA–Protein interactions for RNA: ENST00000555117.1

COCH-208, Transcript of cochlin, humanhuman

TSL 2

Gene COCH, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-208ENST00000555117 NTMQ9P121 344 aa20.23■□□□□ 0.83
COCH-208ENST00000555117 C19orf53Q9UNZ5 99 aaPredicted RBP20.23■□□□□ 0.83
COCH-208ENST00000555117 MAPRE3Q9UPY8 281 aa20.23■□□□□ 0.83
COCH-208ENST00000555117 TEP1Q99973 2627 aaKnown RBP20.23■□□□□ 0.83
COCH-208ENST00000555117 KDM4EB2RXH2 506 aaPredicted RBP20.22■□□□□ 0.83
COCH-208ENST00000555117 UPK1AO00322 258 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 NME6O75414 186 aaPredicted RBP20.22■□□□□ 0.83
COCH-208ENST00000555117 EPPINO95925 133 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 DDX5P17844 614 aaKnown RBP20.22■□□□□ 0.83
COCH-208ENST00000555117 PPICP45877 212 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 WNT3P56703 355 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 EIPR1Q53HC9 387 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 WIPI1Q5MNZ9 446 aaPredicted RBP20.22■□□□□ 0.83
COCH-208ENST00000555117 VASNQ6EMK4 673 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 TMEM200AQ86VY9 491 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 NATD1Q8N6N6 113 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 NAXEQ8NCW5 288 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 STON2Q8WXE9 905 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 TESCQ96BS2 214 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 VSTM2LQ96N03 204 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 EBF4Q9BQW3 602 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 DPY30Q9C005 99 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 BHLHE41Q9C0J9 482 aaPredicted RBP20.22■□□□□ 0.83
COCH-208ENST00000555117 SIRT3Q9NTG7 399 aaPredicted RBP20.22■□□□□ 0.83
COCH-208ENST00000555117 KLRF1Q9NZS2 232 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 CAMK2AQ9UQM7 478 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 L3MBTL1Q9Y468 752 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 CCDC168Q8NDH2 2452 aa20.22■□□□□ 0.83
COCH-208ENST00000555117 SCN2BO60939 215 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 UGT2B11O75310 529 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 EFNA1P20827 205 aaPredicted RBP20.21■□□□□ 0.83
COCH-208ENST00000555117 DRD5P21918 477 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 PTGDSP41222 190 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 AQP5P55064 265 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 MANFP55145 182 aaKnown RBP20.21■□□□□ 0.83
COCH-208ENST00000555117 UFM1P61960 85 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 PHC1P78364 1004 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 GUCY1A3Q02108 690 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 HSPB3Q12988 150 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 NHSL2Q5HYW2 709 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 NXNQ6DKJ4 435 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 SLC30A6Q6NXT4 461 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 LACC1Q8IV20 430 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 RELL2Q8NC24 303 aaPredicted RBP20.21■□□□□ 0.83
COCH-208ENST00000555117 TNIP2Q8NFZ5 429 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 OR8J2Q8NGG1 315 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 ZFP28Q8NHY6 868 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 PSMA8Q8TAA3 256 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 PRPF18Q99633 342 aaKnown RBP20.21■□□□□ 0.83
COCH-208ENST00000555117 DUSP26Q9BV47 211 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 UGT2B28Q9BY64 529 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 GALNT9Q9HCQ5 603 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 ATAD3AQ9NVI7 634 aa20.21■□□□□ 0.83
COCH-208ENST00000555117 GPR55Q9Y2T6 319 aaPredicted RBP20.21■□□□□ 0.83
COCH-208ENST00000555117 A0A1W2PRB8 838 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 C2orf72A6NCS6 295 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 FRG2CA6NGY1 282 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 SNPHO15079 494 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 TO15178 435 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 ICOSLGO75144 302 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 CT45A8P0DMV1 189 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 CT45A9P0DMV2 189 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 BMP7P18075 431 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 BMP5P22003 454 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 IL12AP29459 219 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 CEACAM8P31997 349 aaPredicted RBP20.2■□□□□ 0.82
COCH-208ENST00000555117 SNTA1Q13424 505 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 PDCD4Q53EL6 469 aaKnown RBP20.2■□□□□ 0.82
COCH-208ENST00000555117 CT45A2Q5DJT8 189 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 DCST1Q5T197 706 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 ARSKQ6UWY0 536 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 FAM83FQ8NEG4 500 aaPredicted RBP20.2■□□□□ 0.82
COCH-208ENST00000555117 OR5P2Q8WZ92 322 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 BTBD9Q96Q07 612 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 CCDC28BQ9BUN5 200 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 FOLH1BQ9HBA9 442 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 TCF7L2Q9NQB0 619 aa20.2■□□□□ 0.82
COCH-208ENST00000555117 SDR39U1Q9NRG7 319 aaPredicted RBP20.2■□□□□ 0.82
COCH-208ENST00000555117 PRAMEF25A6NGN4 478 aa20.19■□□□□ 0.82
COCH-208ENST00000555117 DVL2O14641 736 aa20.19■□□□□ 0.82
COCH-208ENST00000555117 IDO1P14902 403 aa20.19■□□□□ 0.82
COCH-208ENST00000555117 TIMP3P35625 211 aa20.19■□□□□ 0.82
COCH-208ENST00000555117 MDH1P40925 334 aaKnown RBP20.19■□□□□ 0.82
COCH-208ENST00000555117 SNTB1Q13884 538 aaKnown RBP20.19■□□□□ 0.82
COCH-208ENST00000555117 SF3B4Q15427 424 aaKnown RBP eCLIP20.19■□□□□ 0.827e-7■□□□□ 10.4
COCH-208ENST00000555117 TESK1Q15569 626 aa20.19■□□□□ 0.82
COCH-208ENST00000555117 GSTA3Q16772 222 aa20.19■□□□□ 0.82
COCH-208ENST00000555117 NPSR1Q6W5P4 371 aa20.19■□□□□ 0.82
COCH-208ENST00000555117 YRDCQ86U90 279 aaKnown RBP20.19■□□□□ 0.82
COCH-208ENST00000555117 HOXB13Q92826 284 aaPredicted RBP20.19■□□□□ 0.82
COCH-208ENST00000555117 ABTB1Q969K4 478 aaPredicted RBP20.19■□□□□ 0.82
COCH-208ENST00000555117 TMBIM1Q969X1 311 aa20.19■□□□□ 0.82
COCH-208ENST00000555117 WDYHV1Q96HA8 205 aa20.19■□□□□ 0.82
COCH-208ENST00000555117 MARK4Q96L34 752 aa20.19■□□□□ 0.82
COCH-208ENST00000555117 DDX18Q9NVP1 670 aaKnown RBP20.19■□□□□ 0.82
COCH-208ENST00000555117 TAS2R9Q9NYW1 312 aa20.19■□□□□ 0.82
COCH-208ENST00000555117 F8P00451 2351 aa20.19■□□□□ 0.82
COCH-208ENST00000555117 DOCK7Q96N67 2140 aa20.18■□□□□ 0.82
COCH-208ENST00000555117 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.18■□□□□ 0.82
COCH-208ENST00000555117 OR6C70A6NIJ9 312 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms