RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ZNF783Q6ZMS7 281 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 KDM1BQ8NB78 822 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 HSD17B8Q92506 261 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 MIB2Q96AX9 1013 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 KLRG1Q96E93 195 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF599Q96NL3 588 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 NELL2Q99435 816 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 BIN3Q9NQY0 253 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 DTLQ9NZJ0 730 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 PCDHGA5Q9Y5G8 931 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 ADAMTS13Q76LX8 1427 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 TMEM265A0A087WTH1 108 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 NKX6-3A6NJ46 265 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 SGK494L7N484 410 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 RFPL1O75677 317 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 SEMA4FO95754 770 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF44P15621 663 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 SERPINA2P20848 420 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 CTXN1P60606 82 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 SNRPD2P62316 118 aaKnown RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 ERVK-25P63136 954 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 DSC1Q08554 894 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 TMEM115Q12893 351 aaPredicted RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF791Q3KP31 576 aaPredicted RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF404Q494X3 552 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 FJX1Q86VR8 437 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 CCDC28AQ8IWP9 274 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF679Q8IYX0 411 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 BANPQ8N9N5 519 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 SMG8Q8ND04 991 aaKnown RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 OR5AK2Q8NH90 309 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 ARL11Q969Q4 196 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 C3orf49Q96BT1 292 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 F2RL3Q96RI0 385 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 WTIPA6NIX2 430 aaPredicted RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 C8BP07358 591 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 AFF3P51826 1226 aaKnown RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 TUBA1BP68363 451 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 CATSPEREQ5SY80 951 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 OR52E8Q6IFG1 317 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 TUBA1AQ71U36 451 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 TMEM150AQ86TG1 271 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 RNF128Q8TEB7 428 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 BTBD2Q9BX70 525 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 MVB12BQ9H7P6 319 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 NGBQ9NPG2 151 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 ACTR3BQ9P1U1 418 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 TMEM14AQ9Y6G1 99 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 NPIPA5A0A0B4J1W7 369 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 NPIPA7E9PJI5 369 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 OXSR1O95747 527 aaPredicted RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 HEXAP06865 529 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 GSTP1P09211 210 aaKnown RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 NPIPA8P0DM63 369 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 IL2RGP31785 369 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 SLC14A1Q13336 389 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 DRICH1Q6PGQ1 229 aaPredicted RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 KBTBD6Q86V97 674 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 OR9I1Q8NGQ6 314 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF419Q96HQ0 510 aaPredicted RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 PKP2Q99959 881 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 GFOD1Q9NXC2 390 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 EP300Q09472 2414 aaPredicted RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 DCDC2BA2VCK2 349 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 CRXO43186 299 aaPredicted RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 F10P00742 488 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 HBQ1P09105 142 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 HNRNPDQ14103 355 aaKnown RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 SGPP2Q8IWX5 399 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 OR4A16Q8NH70 328 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 ULBP3Q9BZM4 244 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 TTYH3Q9C0H2 523 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 HHATLQ9HCP6 504 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 B4GALT6Q9UBX8 382 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 GPR52Q9Y2T5 361 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 TRBV11-1A0A0K0K1C0 115 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 CLIC3O95833 236 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 RAB3AP20336 220 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 OMGP23515 440 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 PIGFQ07326 219 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 RPS26P11Q5JNZ5 115 aaPredicted RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 EXOSC6Q5RKV6 272 aaKnown RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 CTU1Q7Z7A3 348 aaKnown RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 SUSD3Q96L08 255 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 TWSG1Q9GZX9 223 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 F5P12259 2224 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 USP31Q70CQ4 1352 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 A8MT66 165 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 TXNL1O43396 289 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 BMP4P12644 408 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 VIPR2P41587 438 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 Q1RN00 199 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 S100A7AQ86SG5 101 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 ZNRF4Q8WWF5 429 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 ZFYVE21Q9BQ24 234 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 FAM117AQ9C073 453 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 DOCK9Q9BZ29 2069 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 TRAV18A0A075B6X5 111 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 HEPACAM2A8MVW5 462 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 TRAPPC2LH3BP13 241 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms