RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 SEMA3AQ14563 771 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 SF3B4Q15427 424 aaKnown RBP eCLIP4.44□□□□□ -1.7
ATXN3-228ENST00000554592 CAPN13Q6MZZ7 669 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-228ENST00000554592 TMEM65Q6PI78 240 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 IL20RBQ6UXL0 311 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 QSOX2Q6ZRP7 698 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 ASPGQ86U10 573 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 LDB1Q86U70 411 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-228ENST00000554592 FBXW8Q8N3Y1 598 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 RELL2Q8NC24 303 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-228ENST00000554592 APCDD1LQ8NCL9 501 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 SRFBP1Q8NEF9 429 aaKnown RBP4.44□□□□□ -1.7
ATXN3-228ENST00000554592 OR5T3Q8NGG3 340 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 SMPDL3BQ92485 455 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 PEX13Q92968 403 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 GPR78Q96P69 363 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 FAM173AQ9BQD7 235 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 BPIFA3Q9BQP9 254 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 CCDC77Q9BR77 488 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 PCBD2Q9H0N5 130 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 P2RY12Q9H244 342 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 EXO5Q9H790 373 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 SLC2A6Q9UGQ3 507 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 PPIEQ9UNP9 301 aaKnown RBP4.44□□□□□ -1.7
ATXN3-228ENST00000554592 RUVBL2Q9Y230 463 aaKnown RBP4.44□□□□□ -1.7
ATXN3-228ENST00000554592 EIF3LQ9Y262 564 aaKnown RBP4.44□□□□□ -1.7
ATXN3-228ENST00000554592 R3HDM2Q9Y2K5 976 aaKnown RBP4.44□□□□□ -1.7
ATXN3-228ENST00000554592 LIPGQ9Y5X9 500 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.44□□□□□ -1.7
ATXN3-228ENST00000554592 COL6A5A8TX70 2615 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 INTS1Q8N201 2190 aaKnown RBP4.44□□□□□ -1.7
ATXN3-228ENST00000554592 HIVEP2P31629 2446 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 RTTNQ86VV8 2226 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 STAB1Q9NY15 2570 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 FBN1P35555 2871 aaKnown RBP4.43□□□□□ -1.7
ATXN3-228ENST00000554592 A0A1W2PPR1 153 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 MACROD2A1Z1Q3 448 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 ZNF860A6NHJ4 632 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 ERI2A8K979 691 aaKnown RBP4.43□□□□□ -1.7
ATXN3-228ENST00000554592 A8MUA0 341 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 H3BMM5 538 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 PSMD12O00232 456 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-228ENST00000554592 ZBTB14O43829 449 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 LCMT2O60294 686 aaKnown RBP4.43□□□□□ -1.7
ATXN3-228ENST00000554592 GALR3O60755 368 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-228ENST00000554592 AVILO75366 819 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 OR2J2O76002 312 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 RFPL3SP0C7P2 107 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 SLC35G6P0C7Q6 338 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 NHLRC4P0CG21 123 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-228ENST00000554592 ALOX12P18054 663 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 FMO4P31512 558 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 OPRM1P35372 400 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 CETN2P41208 172 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 VPS41P49754 854 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 ZNF84P51523 738 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 GPR143P51810 404 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 NR1H2P55055 460 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 BTG2P78543 158 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 RPS6KA1Q15418 735 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 SIX1Q15475 284 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-228ENST00000554592 ACKR1Q16570 336 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 KLHL38Q2WGJ6 581 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 XKR6Q5GH73 641 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 KIAA0930Q6ICG6 404 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-228ENST00000554592 HEPHL1Q6MZM0 1159 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 RTL4Q6ZR62 310 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 FAM47EQ6ZV65 393 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 SDCCAG8Q86SQ7 713 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-228ENST00000554592 SLC26A11Q86WA9 606 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 MFSD9Q8NBP5 474 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 PPFIBP2Q8ND30 876 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 PPHLN1Q8NEY8 458 aaKnown RBP4.43□□□□□ -1.7
ATXN3-228ENST00000554592 TNIP2Q8NFZ5 429 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 OR52K1Q8NGK4 314 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 ZCCHC10Q8TBK6 192 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 VMP1Q96GC9 406 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 ZNF845Q96IR2 970 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-228ENST00000554592 CAPZA3Q96KX2 299 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 FYTTD1Q96QD9 318 aaKnown RBP4.43□□□□□ -1.7
ATXN3-228ENST00000554592 GATA5Q9BWX5 397 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-228ENST00000554592 ACKR4Q9NPB9 350 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 ABCF3Q9NUQ8 709 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 ZNHIT6Q9NWK9 470 aaKnown RBP4.43□□□□□ -1.7
ATXN3-228ENST00000554592 SPRR3Q9UBC9 169 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 NDRG3Q9UGV2 375 aa4.43□□□□□ -1.7
ATXN3-228ENST00000554592 IGKV3D-11A0A0A0MRZ8 115 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 A0A0G2JMM0 328 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 A0A1W2PPB8 328 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 A0A1W2PRS3 328 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 KIR3DP1A8MWS1 328 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 G3V3Y1 287 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 GFYI3L273 518 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 DYNC1I1O14576 645 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 PFDN6O15212 129 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 MYO1DO94832 1006 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 OR6B1O95007 311 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 SYF2O95926 243 aaKnown RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 P04436 131 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 ALDOCP09972 364 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms