RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 RP1P56715 2156 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 METTL15A6NJ78 407 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 CHURC1-FNTBB4DL54 471 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 DSCR3O14972 297 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 POLR1CO15160 346 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-212ENST00000554467 RGS10O43665 173 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 ZNF217O75362 1048 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 UBXN7O94888 489 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 CCNB2O95067 398 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 SMIM10L1P0DMW3 83 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 FOSL2P15408 326 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 CD36P16671 472 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 NAGAP17050 411 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 RHCEP18577 417 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 GSTM5P46439 218 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 CRISP3P54108 245 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 MAD2L1BPQ15013 274 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-212ENST00000554467 SYT6Q5T7P8 510 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-212ENST00000554467 MLIPQ5VWP3 458 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 ZC3H14Q6PJT7 736 aaKnown RBP10.92□□□□□ -0.66
SHMT2-212ENST00000554467 PRR23CQ6ZRP0 262 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 SLC51BQ86UW2 128 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 SMIM10Q96HG1 83 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 BCL7BQ9BQE9 202 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 RERGLQ9H628 205 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 GPR27Q9NS67 375 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 ARID1BQ8NFD5 2236 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-212ENST00000554467 A0A0A6YYC8 382 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-212ENST00000554467 NPIPA5A0A0B4J1W7 369 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 CENPVL1A0A0U1RR11 272 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 CENPXA8MT69 81 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 METTL12A8MUP2 240 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 NPIPA7E9PJI5 369 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 I3L1I5 382 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-212ENST00000554467 TLR4O00206 839 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 OR10H3O60404 316 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 WBP4O75554 376 aaKnown RBP10.92□□□□□ -0.66
SHMT2-212ENST00000554467 NPIPA8P0DM63 369 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 CD27P26842 260 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 RYKP34925 604 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 BLKP51451 505 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 PDX1P52945 283 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 SOWAHCQ53LP3 525 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-212ENST00000554467 C16orf62Q7Z3J2 963 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 ZNF605Q86T29 641 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 APH1BQ8WW43 257 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 ZHX1-C8orf76Q96EF9 292 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 SLC35A4Q96G79 324 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 ZNF764Q96H86 408 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-212ENST00000554467 ZNF354BQ96LW1 612 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 TGM7Q96PF1 710 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 ACOXLQ9NUZ1 547 aa10.92□□□□□ -0.66
SHMT2-212ENST00000554467 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 NT5EP21589 574 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 SOX18P35713 384 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 AVPR1BP47901 424 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 CTAG1AP78358 180 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 MVKQ03426 396 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 TOP3AQ13472 1001 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-212ENST00000554467 CCDC28AQ8IWP9 274 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 CACTIN-AS1Q8N1I8 211 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 OR56A1Q8NGH5 318 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 GIMAP5Q96F15 307 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 FYTTD1Q96QD9 318 aaKnown RBP10.91□□□□□ -0.66
SHMT2-212ENST00000554467 RNF167Q9H6Y7 350 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 C3orf14Q9HBI5 128 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 ATP13A2Q9NQ11 1180 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 C11orf16Q9NQ32 467 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 SATB2Q9UPW6 733 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 SLC22A7Q9Y694 548 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 BDP1A6H8Y1 2624 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 THADAQ6YHU6 1953 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 C12orf71A8MTZ7 269 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 SCO1O75880 301 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 CSF2P04141 144 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 NAT2P11245 290 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 M6PRP20645 277 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 KCNAB1Q14722 419 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 ZNF404Q494X3 552 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 DGAT2L6Q6ZPD8 337 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 KRT73Q86Y46 540 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 ADAMTS15Q8TE58 950 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 FBLIM1Q8WUP2 373 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 PIK3R3Q92569 461 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 MSANTD3Q96H12 275 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 SLC38A3Q99624 504 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 SLA2Q9H6Q3 261 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 TBC1D17Q9HA65 648 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 ZNF556Q9HAH1 456 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 FBXO34Q9NWN3 711 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 C14orf119Q9NWQ9 140 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 NPAP1Q9NZP6 1156 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 POMT2Q9UKY4 750 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 TBC1D24Q9ULP9 559 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 HCN4Q9Y3Q4 1203 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 A0A1W2PR77 199 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 OR5K4A6NMS3 321 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 TRIM77I1YAP6 450 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 PDE9AO76083 593 aa10.91□□□□□ -0.66
SHMT2-212ENST00000554467 CT62P0C5K7 136 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms