RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 S100A3P33764 101 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 PTGS2P35354 604 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 KIR3DL1P43629 444 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 RFX3P48380 749 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 MAN2A2P49641 1150 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 TDGF1P3P51864 188 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 PNLIPRP2P54317 469 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 STX1BP61266 288 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 RAC1P63000 192 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 OCRLQ01968 901 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 LRRC74AQ0VAA2 488 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 SNTA1Q13424 505 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 MLC1Q15049 377 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 C21orf62-AS1Q17RA5 79 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 TM4SF20Q53R12 229 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 ARHGAP11AQ6P4F7 1023 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 ZCCHC12Q6PEW1 402 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF227Q86WZ6 799 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 SPPL2CQ8IUH8 684 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 OR2L13Q8N349 312 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 OR7A2PQ8NGA2 310 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 GPR151Q8TDV0 419 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 SSC4DQ8WTU2 575 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 SLC9A6Q92581 669 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 VSTM2LQ96N03 204 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 C7orf26Q96N11 449 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 ADOQ96SZ5 270 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 OSBPL11Q9BXB4 747 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 TTTY12Q9BZ98 90 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 C20orf27Q9GZN8 174 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 DEFB127Q9H1M4 99 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 GSX1Q9H4S2 264 aaPredicted RBP7.65□□□□□ -1.18
PSEN1-209ENST00000553855 QPCTLQ9NXS2 382 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 TUBA8Q9NY65 449 aaPredicted RBP7.65□□□□□ -1.18
PSEN1-209ENST00000553855 SH3BGRL2Q9UJC5 107 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 CNOT11Q9UKZ1 510 aaKnown RBP7.65□□□□□ -1.18
PSEN1-209ENST00000553855 CBLCQ9ULV8 474 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 EXO1Q9UQ84 846 aaKnown RBP7.65□□□□□ -1.18
PSEN1-209ENST00000553855 DTX4Q9Y2E6 619 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 CHCHD2Q9Y6H1 151 aaPredicted RBP7.65□□□□□ -1.18
PSEN1-209ENST00000553855 CFAP46Q8IYW2 2715 aa7.65□□□□□ -1.19
PSEN1-209ENST00000553855 A0A1B0GTH9 108 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 E9PBE3 544 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 CCL21O00585 134 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 SDHDO14521 159 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 UBDO15205 165 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 ZNF354AO60765 605 aaPredicted RBP7.64□□□□□ -1.19
PSEN1-209ENST00000553855 PDE9AO76083 593 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 TGDSO95455 350 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 C6orf47O95873 294 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 STSP08842 583 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 LAMP1P11279 417 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 IDO1P14902 403 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 HOXB4P17483 251 aaPredicted RBP7.64□□□□□ -1.19
PSEN1-209ENST00000553855 ATP6V1C1P21283 382 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 GABRA3P34903 492 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 CASP3P42574 277 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 CCT3P49368 545 aaKnown RBP7.64□□□□□ -1.19
PSEN1-209ENST00000553855 CDK9P50750 372 aaKnown RBP7.64□□□□□ -1.19
PSEN1-209ENST00000553855 ANXA11P50995 505 aaKnown RBP7.64□□□□□ -1.19
PSEN1-209ENST00000553855 SMSP52788 366 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 DIO3P55073 304 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 CORO7P57737 925 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 GSTA3Q16772 222 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 ZNF385BQ569K4 471 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 FOXB2Q5VYV0 432 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 CES4AQ5XG92 561 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 OGFOD2Q6N063 350 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 ANGPTL8Q6UXH0 198 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 FJX1Q86VR8 437 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 TMEM251Q8N6I4 163 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 KRTCAP2Q8N6L1 136 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 TRIML2Q8N7C3 387 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 COX18Q8N8Q8 333 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 GLB1L3Q8NCI6 653 aaPredicted RBP7.64□□□□□ -1.19
PSEN1-209ENST00000553855 OR4A15Q8NGL6 344 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 OR1J4Q8NGS1 313 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 ACTRT2Q8TDY3 377 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 ADAMTS15Q8TE58 950 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 KISS1RQ969F8 398 aaPredicted RBP7.64□□□□□ -1.19
PSEN1-209ENST00000553855 SARAFQ96BY9 339 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 COQ8BQ96D53 544 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 SLC35A4Q96G79 324 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 RILPQ96NA2 401 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 LMF2Q9BU23 707 aaKnown RBP7.64□□□□□ -1.19
PSEN1-209ENST00000553855 G6PC3Q9BUM1 346 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 ANGPTL4Q9BY76 406 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 ANKRA2Q9H9E1 313 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 DEPPQ9NTK1 212 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 ACAD8Q9UKU7 415 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 USH1CQ9Y6N9 552 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 CPAMD8Q8IZJ3 1885 aa7.64□□□□□ -1.19
PSEN1-209ENST00000553855 USP9XQ93008 2570 aaPredicted RBP7.64□□□□□ -1.19
PSEN1-209ENST00000553855 BOD1L1Q8NFC6 3051 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 TRGV5A0A0B4J1U4 118 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 TRAV20A0A0B4J274 112 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 PRSS51A0A1B0GVH4 220 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 OR14I1A6ND48 311 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 DUXAA6NLW8 204 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 RNASET2O00584 256 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms