RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 EFCAB10A6NFE3 127 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 SNTNA6NMZ2 147 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 CLCA1A8K7I4 914 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 H3BSA7 217 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 J3KTA2 159 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 SGK494L7N484 410 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 PCDH17O14917 1159 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 FOXS1O43638 330 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 OR10H3O60404 316 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 NME6O75414 186 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 RDH16O75452 317 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 CYP7B1O75881 506 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 GASTP01350 101 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 H2AFB1P0C5Y9 115 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 H2AFB2P0C5Z0 115 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 ANKRD34CP0C6C1 535 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 PIPP12273 146 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 IL7RP16871 459 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 MAOBP27338 520 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 CNR2P34972 360 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 POLR2IP36954 125 aaKnown RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 STT3AP46977 705 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 CSNK1EP49674 416 aaKnown RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 TAS2R41P59536 307 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 OLR1P78380 273 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 POU6F2P78424 691 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 TAGLNQ01995 201 aaKnown RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 SLC13A2Q13183 592 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 GANABQ14697 944 aaKnown RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 RAB39AQ14964 217 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 PTGES3Q15185 160 aaKnown RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 LTB4RQ15722 352 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 NPTX1Q15818 432 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 DUSP5Q16690 384 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 DECR1Q16698 335 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 DEFB133Q30KQ1 61 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 ENTPD8Q5MY95 495 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 DCST2Q5T1A1 773 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 MEDAGQ5VYS4 303 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 SLX4IPQ5VYV7 408 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 XAF1Q6GPH4 301 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 TYW3Q6IPR3 259 aaKnown RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 LAIR2Q6ISS4 152 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 PGBD2Q6P3X8 592 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 FRRS1Q6ZNA5 592 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 LINC00299Q6ZSB3 139 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 RRM2BQ7LG56 351 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 B3GNT8Q7Z7M8 397 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 ZNF761Q86XN6 746 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 GRAMD2AQ8IUY3 354 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 TMEFF1Q8IYR6 380 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 ENTHD1Q8IYW4 607 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 RNF113BQ8IZP6 322 aaKnown RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 SLC43A2Q8N370 569 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 D2HGDHQ8N465 521 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 CLDN22Q8N7P3 220 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 ZNF540Q8NDQ6 660 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 OR6T1Q8NGN1 323 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 OR8J1Q8NGP2 316 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 OR9A4Q8NGU2 314 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 OR52J3Q8NH60 311 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 FAM81AQ8TBF8 368 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 SLC7A13Q8TCU3 470 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 GNPDA2Q8TDQ7 276 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 ACOT11Q8WXI4 607 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 RORBQ92753 470 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 RIT1Q92963 219 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 MUL1Q969V5 352 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 ISOC1Q96CN7 298 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 SLC41A2Q96JW4 573 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 DGAT2Q96PD7 388 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 TGM7Q96PF1 710 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 CCNL2Q96S94 520 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 NIPSNAP1Q9BPW8 284 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 G6PC3Q9BUM1 346 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 HOXD1Q9GZZ0 328 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 KLHL25Q9H0H3 589 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 FANCEQ9HB96 536 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 EQTNQ9NQ60 294 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 PRMT8Q9NR22 394 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 PRTFDC1Q9NRG1 225 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 FKBP14Q9NWM8 211 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 CLN6Q9NWW5 311 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 FTSJ1Q9UET6 329 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 PRODH2Q9UF12 536 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 TESQ9UGI8 421 aaKnown RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 PSORS1C1Q9UIG5 152 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 SERTAD3Q9UJW9 196 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 RNF6Q9Y252 685 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 RNF215Q9Y6U7 377 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 ZFC3H1O60293 1989 aaKnown RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 PRRC2BQ5JSZ5 2229 aaKnown RBP6.8□□□□□ -1.32
ATXN3-221ENST00000553498 PIKFYVEQ9Y2I7 2098 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 LRRK1Q38SD2 2015 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 A0A0A6YYC8 382 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 TRBV4-1A0A0J9YWV2 114 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 ZNF860A6NHJ4 632 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 VGLL3A8MV65 326 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 ZNF99A8MXY4 864 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 I3L1I5 382 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms