RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ZC3HAV1LQ96H79 300 aaKnown RBP6.54□□□□□ -1.36
ATXN3-219ENST00000553488 UBXN10Q96LJ8 280 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 SFXN2Q96NB2 322 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 MTERF1Q99551 399 aaKnown RBP6.54□□□□□ -1.36
ATXN3-219ENST00000553488 CD244Q9BZW8 370 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 CXorf56Q9H5V9 222 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 CAB39LQ9H9S4 337 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 SMYD2Q9NRG4 433 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 ELOVL5Q9NYP7 299 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 TAS2R10Q9NYW0 307 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 MOCS1Q9NZB8 636 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 EHD3Q9NZN3 535 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 KLRF1Q9NZS2 232 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 FRG2CA6NGY1 282 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 SLC22A20A6NK97 555 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 C17orf51A8MQB3 221 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 OVOL3O00110 214 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 HS3ST1O14792 307 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 TO15178 435 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 ACOX3O15254 700 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 EMC8O43402 210 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 ZIC3O60481 467 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 PIAS1O75925 651 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 IFNA2P01563 188 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 DBHP09172 617 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 CCDC166P0CW27 439 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 CPMP14384 443 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 KRT15P19012 456 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 GAS1P54826 345 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 ATP6V0D1P61421 351 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 SIRPAP78324 504 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 HMGCS1Q01581 520 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 PLCXD2Q0VAA5 305 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 CUL3Q13618 768 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 VEZF1Q14119 521 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 PPP1R7Q15435 360 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 ETFDHQ16134 617 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 BCL2A1Q16548 175 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 CLEC12BQ2HXU8 276 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 PRICKLE4Q2TBC4 344 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 KRTAP24-1Q3LI83 254 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 C10orf62Q5T681 223 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-219ENST00000553488 AAGABQ6PD74 315 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 SH2D5Q6ZV89 423 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 NUP54Q7Z3B4 507 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 NUDT13Q86X67 352 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 PLCZ1Q86YW0 608 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 PDIK1LQ8N165 341 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 SPC24Q8NBT2 197 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 WDR20Q8TBZ3 569 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 EXT2Q93063 718 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 LRRC39Q96DD0 335 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 SLC35A4Q96G79 324 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 ZNF845Q96IR2 970 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-219ENST00000553488 LCORQ96JN0 433 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-219ENST00000553488 ATOH8Q96SQ7 321 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 GPR22Q99680 433 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 REG4Q9BYZ8 158 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 RNF122Q9H9V4 155 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 PSD3Q9NYI0 1048 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 NUDT4Q9NZJ9 180 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 MAT2BQ9NZL9 334 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 CD274Q9NZQ7 290 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 ASIC3Q9UHC3 531 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 ZNF639Q9UID6 485 aa6.53□□□□□ -1.36
ATXN3-219ENST00000553488 MTO1Q9Y2Z2 717 aaKnown RBP6.53□□□□□ -1.36
ATXN3-219ENST00000553488 MRPS18CQ9Y3D5 142 aaKnown RBP6.53□□□□□ -1.36
ATXN3-219ENST00000553488 MGAM2Q2M2H8 2515 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 CMYA5Q8N3K9 4069 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 A0A096LNT2 108 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 OR6C70A6NIJ9 312 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 E7ESA3 106 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 H0YC42 278 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 H0YIV9 168 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 K7EPI3 171 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 UBXN8O00124 270 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 GBAP04062 536 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 ATP1B1P05026 303 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 DANCRP0C864 163 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 MTHFD2P13995 350 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 TCEA1P23193 301 aaKnown RBP6.52□□□□□ -1.37
ATXN3-219ENST00000553488 PIK3R1P27986 724 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 SUCLG1P53597 346 aaKnown RBP6.52□□□□□ -1.37
ATXN3-219ENST00000553488 TPD52P55327 224 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-219ENST00000553488 RPS4XP62701 263 aaKnown RBP6.52□□□□□ -1.37
ATXN3-219ENST00000553488 DUSP2Q05923 314 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 ZNF844Q08AG5 666 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 DLG1Q12959 904 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 MORF4L2Q15014 288 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 EXOSC7Q15024 291 aaKnown RBP6.52□□□□□ -1.37
ATXN3-219ENST00000553488 DPY19L1Q2PZI1 675 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 FAM111BQ6SJ93 734 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 CYP20A1Q6UW02 462 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 STAC2Q6ZMT1 411 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 P4HA3Q7Z4N8 544 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 GBP7Q8N8V2 638 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-219ENST00000553488 ZNF610Q8N9Z0 462 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 BVESQ8NE79 360 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 FBXO36Q8NEA4 188 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms