RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 GRIP2Q9C0E4 1043 aa18.12■□□□□ 0.49
RBFOX1-215ENST00000553186 OR8D2Q9GZM6 311 aa18.12■□□□□ 0.49
RBFOX1-215ENST00000553186 ZNF696Q9H7X3 374 aa18.12■□□□□ 0.49
RBFOX1-215ENST00000553186 Q9N2J8 555 aa18.12■□□□□ 0.49
RBFOX1-215ENST00000553186 NUP210LQ5VU65 1888 aa18.12■□□□□ 0.49
RBFOX1-215ENST00000553186 LOC100130705A0A1B0GUX0 176 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 A0A1W2PRQ8 180 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 TTC36A6NLP5 189 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 PRR33A8MZF0 331 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 TNFAIP8O95379 198 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 ANXA8P13928 327 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 ELAVL4P26378 380 aaKnown RBP18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 MC2RQ01718 297 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 OCA2Q04671 838 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 DGCR6Q14129 220 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 SEC23BQ15437 767 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 NNATQ16517 81 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 OVCH1Q7RTY7 1134 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 ZNF555Q8NEP9 628 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 PRR14Q9BWN1 585 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 MAN2C1Q9NTJ4 1040 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 KLHL28Q9NXS3 571 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 WDFY3Q8IZQ1 3526 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 VSTM2BA6NLU5 285 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 DYRK3O43781 588 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 CCNB2O95067 398 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 EPHA2P29317 976 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 FOXD4Q12950 439 aaPredicted RBP18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 LIN52Q52LA3 116 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 LCN10Q6JVE6 187 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 LANCL3Q6ZV70 420 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 NAXDQ8IW45 347 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 TAGAPQ8N103 731 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 SLC7A13Q8TCU3 470 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 NIPSNAP1Q9BPW8 284 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 CACYBPQ9HB71 228 aaKnown RBP18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 FBXO8Q9NRD0 319 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 C14orf105Q9NVL8 296 aa18.11■□□□□ 0.49
RBFOX1-215ENST00000553186 E9PQ18 207 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 MEN1O00255 615 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 CBLP22681 906 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 CCKBRP32239 447 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 RFX3P48380 749 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 IL1RL1Q01638 556 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 FLYWCH1Q4VC44 716 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 RNF220Q5VTB9 566 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 OR14A16Q8NHC5 309 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 DAZLQ92904 295 aaKnown RBP18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 FKBP10Q96AY3 582 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 SLC46A1Q96NT5 459 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 RIBC2Q9H4K1 309 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 CBLCQ9ULV8 474 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 CDHR4A6H8M9 788 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 CPNE3O75131 537 aaKnown RBP18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 CNOT3O75175 753 aaKnown RBP18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 ZNF28P17035 718 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 SMIM11AP58511 58 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 HOXC5Q00444 222 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 PLAURQ03405 335 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 EIPR1Q53HC9 387 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 FGD3Q5JSP0 725 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 MRPL2Q5T653 305 aaKnown RBP18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 BCORP1Q8N888 145 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 PMEPA1Q969W9 287 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 EDEM2Q9BV94 578 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 FNDC11Q9BVV2 318 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 NUDT9Q9BW91 350 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 GABARAPL3Q9BY60 117 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 AKIRIN1Q9H9L7 192 aaPredicted RBP18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 BATF3Q9NR55 127 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 CTPS2Q9NRF8 586 aa18.1■□□□□ 0.49
RBFOX1-215ENST00000553186 IDSB3KWA1 339 aa18.09■□□□□ 0.49
RBFOX1-215ENST00000553186 NPIPB9F8W1W9 429 aa18.09■□□□□ 0.49
RBFOX1-215ENST00000553186 PRKNO60260 465 aaPredicted RBP18.09■□□□□ 0.49
RBFOX1-215ENST00000553186 CDH2P19022 906 aaPredicted RBP18.09■□□□□ 0.49
RBFOX1-215ENST00000553186 ZNF136P52737 540 aa18.09■□□□□ 0.49
RBFOX1-215ENST00000553186 RGS8P57771 180 aaPredicted RBP18.09■□□□□ 0.49
RBFOX1-215ENST00000553186 DCST1Q5T197 706 aa18.09■□□□□ 0.49
RBFOX1-215ENST00000553186 RBM44Q6ZP01 1051 aaKnown RBP18.09■□□□□ 0.49
RBFOX1-215ENST00000553186 DIO2Q92813 273 aa18.09■□□□□ 0.49
RBFOX1-215ENST00000553186 SLC26A1Q9H2B4 701 aa18.09■□□□□ 0.49
RBFOX1-215ENST00000553186 PAPOLBQ9NRJ5 636 aaKnown RBP18.09■□□□□ 0.49
RBFOX1-215ENST00000553186 COL27A1Q8IZC6 1860 aaPredicted RBP18.09■□□□□ 0.49
RBFOX1-215ENST00000553186 CFAP54Q96N23 3096 aa18.09■□□□□ 0.49
RBFOX1-215ENST00000553186 SYNDIG1LA6NDD5 238 aa18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 H3BNH8 94 aa18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 FAAHO00519 579 aa18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 BCAS1O75363 584 aaPredicted RBP18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 SEC24DO94855 1032 aaPredicted RBP18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 GASTP01350 101 aa18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 SMIM18P0DKX4 95 aa18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 CYP4B1P13584 511 aa18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 PPICP45877 212 aa18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 CLK3P49761 638 aaKnown RBP18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 SPEM2Q0P670 501 aa18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 NPRL3Q12980 569 aa18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 AQP11Q8NBQ7 271 aa18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 ADIPOR1Q96A54 375 aa18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 G6PC3Q9BUM1 346 aa18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 TMCC3Q9ULS5 477 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms