RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 ACTR6Q9GZN1 396 aa14.63□□□□□ -0.07
RAB5C-209ENST00000552162 GIMAP4Q9NUV9 329 aa14.63□□□□□ -0.07
RAB5C-209ENST00000552162 XPR1Q9UBH6 696 aa14.63□□□□□ -0.07
RAB5C-209ENST00000552162 MCM8Q9UJA3 840 aa14.63□□□□□ -0.07
RAB5C-209ENST00000552162 CLEC4AQ9UMR7 237 aa14.63□□□□□ -0.07
RAB5C-209ENST00000552162 AP4B1Q9Y6B7 739 aa14.63□□□□□ -0.07
RAB5C-209ENST00000552162 PPP6CO00743 305 aa14.62□□□□□ -0.07
RAB5C-209ENST00000552162 PLOD3O60568 738 aa14.62□□□□□ -0.07
RAB5C-209ENST00000552162 SS18L1O75177 396 aaPredicted RBP14.62□□□□□ -0.07
RAB5C-209ENST00000552162 SMIM24O75264 130 aa14.62□□□□□ -0.07
RAB5C-209ENST00000552162 RPS17P08708 135 aaKnown RBP14.62□□□□□ -0.07
RAB5C-209ENST00000552162 RBP1P09455 135 aa14.62□□□□□ -0.07
RAB5C-209ENST00000552162 EIF1AXP47813 144 aaKnown RBP14.62□□□□□ -0.07
RAB5C-209ENST00000552162 SLC6A8P48029 635 aa14.62□□□□□ -0.07
RAB5C-209ENST00000552162 GGNQ86UU5 652 aa14.62□□□□□ -0.07
RAB5C-209ENST00000552162 FAM9CQ8IZT9 166 aa14.62□□□□□ -0.07
RAB5C-209ENST00000552162 TRMT61AQ96FX7 289 aaKnown RBP14.62□□□□□ -0.07
RAB5C-209ENST00000552162 FANCFQ9NPI8 374 aa14.62□□□□□ -0.07
RAB5C-209ENST00000552162 VPS29Q9UBQ0 182 aa14.62□□□□□ -0.07
RAB5C-209ENST00000552162 RNF14Q9UBS8 474 aa14.62□□□□□ -0.07
RAB5C-209ENST00000552162 SHISA8B8ZZ34 492 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 OVOL3O00110 214 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 EIF1AYO14602 144 aaKnown RBP14.61□□□□□ -0.07
RAB5C-209ENST00000552162 TLX2O43763 284 aaPredicted RBP14.61□□□□□ -0.07
RAB5C-209ENST00000552162 CD5LO43866 347 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 PCDH7O60245 1069 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 COQ9O75208 318 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 TSPAN8P19075 237 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 CAV1Q03135 178 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 GLYR1Q49A26 553 aaPredicted RBP14.61□□□□□ -0.07
RAB5C-209ENST00000552162 LGSNQ5TDP6 509 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 BEND4Q6ZU67 534 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 MARCH3Q86UD3 253 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 HIPK1Q86Z02 1210 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 RAB3IL1Q8TBN0 382 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 ZNF483Q8TF39 744 aaPredicted RBP14.61□□□□□ -0.07
RAB5C-209ENST00000552162 DUSP19Q8WTR2 217 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 TMEM158Q8WZ71 300 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 SLC35C2Q9NQQ7 365 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 YAE1D1Q9NRH1 226 aa14.61□□□□□ -0.07
RAB5C-209ENST00000552162 FAM120CQ9NX05 1096 aaKnown RBP14.61□□□□□ -0.07
RAB5C-209ENST00000552162 GNG14A0A1W2PPG7 69 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 GMFGO60234 142 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 OR4F21O95013 312 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 SOD3P08294 240 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 HSD3B1P14060 373 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 IL11P20809 199 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 HSD3B2P26439 372 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 MPIP34949 423 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 IDUAP35475 653 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 CDKN1AP38936 164 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 CLK3P49761 638 aaKnown RBP14.6□□□□□ -0.07
RAB5C-209ENST00000552162 CDH13P55290 713 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 GUCY2DQ02846 1103 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 ZNF844Q08AG5 666 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 DECR1Q16698 335 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.6□□□□□ -0.07
RAB5C-209ENST00000552162 TMEM44Q2T9K0 475 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 CTU2Q2VPK5 515 aaKnown RBP14.6□□□□□ -0.07
RAB5C-209ENST00000552162 CYP27C1Q4G0S4 372 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 TCHHL1Q5QJ38 904 aaPredicted RBP14.6□□□□□ -0.07
RAB5C-209ENST00000552162 ALKBH2Q6NS38 261 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 ADAM5Q6NVV9 412 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 ZDHHC24Q6UX98 284 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 STK32CQ86UX6 486 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 LILRB1Q8NHL6 650 aaPredicted RBP14.6□□□□□ -0.07
RAB5C-209ENST00000552162 FBXW5Q969U6 566 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 GTPBP3Q969Y2 492 aaKnown RBP14.6□□□□□ -0.07
RAB5C-209ENST00000552162 TACO1Q9BSH4 297 aaKnown RBP14.6□□□□□ -0.07
RAB5C-209ENST00000552162 OR10A4Q9H209 315 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 KCNF1Q9H3M0 494 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 STOML1Q9UBI4 398 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 ZNF225Q9UK10 706 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 MCTS1Q9ULC4 181 aaKnown RBP14.6□□□□□ -0.07
RAB5C-209ENST00000552162 GPR52Q9Y2T5 361 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 UTP11Q9Y3A2 253 aaKnown RBP14.6□□□□□ -0.07
RAB5C-209ENST00000552162 RNF115Q9Y4L5 304 aa14.6□□□□□ -0.07
RAB5C-209ENST00000552162 CLOCKO15516 846 aa14.59□□□□□ -0.07
RAB5C-209ENST00000552162 PSMB1P20618 241 aaKnown RBP14.59□□□□□ -0.07
RAB5C-209ENST00000552162 ACVR1BP36896 505 aa14.59□□□□□ -0.07
RAB5C-209ENST00000552162 RFX3P48380 749 aa14.59□□□□□ -0.07
RAB5C-209ENST00000552162 RAE1P78406 368 aaKnown RBP14.59□□□□□ -0.07
RAB5C-209ENST00000552162 C2orf54Q08AI8 447 aa14.59□□□□□ -0.07
RAB5C-209ENST00000552162 CSTF3Q12996 717 aaKnown RBP14.59□□□□□ -0.07
RAB5C-209ENST00000552162 HEPACAMQ14CZ8 416 aa14.59□□□□□ -0.07
RAB5C-209ENST00000552162 TRADDQ15628 312 aa14.59□□□□□ -0.07
RAB5C-209ENST00000552162 SPATA4Q8NEY3 305 aa14.59□□□□□ -0.07
RAB5C-209ENST00000552162 OR10D3Q8NH80 312 aa14.59□□□□□ -0.07
RAB5C-209ENST00000552162 BBS4Q96RK4 519 aa14.59□□□□□ -0.07
RAB5C-209ENST00000552162 TBL1XR1Q9BZK7 514 aa14.59□□□□□ -0.07
RAB5C-209ENST00000552162 SLCO5A1Q9H2Y9 848 aa14.59□□□□□ -0.07
RAB5C-209ENST00000552162 Q9N2J8 555 aa14.59□□□□□ -0.07
RAB5C-209ENST00000552162 VDAC3Q9Y277 283 aa14.59□□□□□ -0.07
RAB5C-209ENST00000552162 MAGED1Q9Y5V3 778 aaPredicted RBP14.59□□□□□ -0.07
RAB5C-209ENST00000552162 A0A087WV62 115 aa14.58□□□□□ -0.08
RAB5C-209ENST00000552162 IGLV3-32A0A0A0MS00 114 aa14.58□□□□□ -0.08
RAB5C-209ENST00000552162 MANBAO00462 879 aa14.58□□□□□ -0.08
RAB5C-209ENST00000552162 IL33O95760 270 aa14.58□□□□□ -0.08
RAB5C-209ENST00000552162 ANGPTL1O95841 491 aa14.58□□□□□ -0.08
RAB5C-209ENST00000552162 KRT6AP02538 564 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms