RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 FIG4Q92562 907 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 GFM2Q969S9 779 aaKnown RBP11.58□□□□□ -0.56
PTCH1-221ENST00000550914 C1GALT1C1Q96EU7 318 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 PIK3IP1Q96FE7 263 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 TMEM237Q96Q45 408 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 FMO2Q99518 471 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 CCL19Q99731 98 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 PIGQQ9BRB3 760 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 PINK1Q9BXM7 581 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 OPN3Q9H1Y3 402 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-221ENST00000550914 GRID1Q9ULK0 1009 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 C19orf53Q9UNZ5 99 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-221ENST00000550914 WBP11Q9Y2W2 641 aaKnown RBP11.58□□□□□ -0.56
PTCH1-221ENST00000550914 ZNF337Q9Y3M9 751 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 AP4B1Q9Y6B7 739 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 IGLV3-32A0A0A0MS00 114 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 TTC36A6NLP5 189 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 SCO2O43819 266 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 DLX3O60479 287 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 TMCC2O75069 709 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 NME6O75414 186 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-221ENST00000550914 IL33O95760 270 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 ANXA4P09525 319 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-221ENST00000550914 PPP3CBP16298 524 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 TCEA1P23193 301 aaKnown RBP11.57□□□□□ -0.56
PTCH1-221ENST00000550914 ATP5F1P24539 256 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-221ENST00000550914 KCNJ5P48544 419 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 CLK3P49761 638 aaKnown RBP11.57□□□□□ -0.56
PTCH1-221ENST00000550914 SUCLG1P53597 346 aaKnown RBP11.57□□□□□ -0.56
PTCH1-221ENST00000550914 PRKAA2P54646 552 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 PSMD4P55036 377 aaKnown RBP11.57□□□□□ -0.56
PTCH1-221ENST00000550914 TEX35Q5T0J7 233 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 FAM214BQ7L5A3 538 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 CNPY4Q8N129 248 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 OR2L13Q8N349 312 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 METTL25Q8N6Q8 603 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.57□□□□□ -0.56
PTCH1-221ENST00000550914 FNDC9Q8TBE3 224 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 NUDT8Q8WV74 236 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 L3HYPDHQ96EM0 354 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 APIPQ96GX9 242 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 Q96MF0 132 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 GSX2Q9BZM3 304 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 UBTD1Q9HAC8 227 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 Q9N2J8 555 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 MED11Q9P086 117 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 STOML1Q9UBI4 398 aa11.57□□□□□ -0.56
PTCH1-221ENST00000550914 C17orf51A8MQB3 221 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 H7C1Q1 480 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 PAX1P15863 534 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 TBXA2RP21731 343 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 LOXP28300 417 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-221ENST00000550914 HTR6P50406 440 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 NCBP2P52298 156 aaKnown RBP eCLIP11.56□□□□□ -0.56
PTCH1-221ENST00000550914 SIRPAP78324 504 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 C17orf67Q0P5P2 114 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 PON3Q15166 354 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 ZNHIT3Q15649 155 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-221ENST00000550914 TMEM44Q2T9K0 475 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 FAM219BQ5XKK7 198 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 YTHDF3Q7Z739 585 aaKnown RBP11.56□□□□□ -0.56
PTCH1-221ENST00000550914 MMGT1Q8N4V1 131 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 ZNF610Q8N9Z0 462 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 PPP1R14CQ8TAE6 165 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 FAM76AQ8TAV0 307 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 LMF2Q9BU23 707 aaKnown RBP11.56□□□□□ -0.56
PTCH1-221ENST00000550914 C3orf14Q9HBI5 128 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 MYNNQ9NPC7 610 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 MIEF1Q9NQG6 463 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 PAQR5Q9NXK6 330 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-221ENST00000550914 TMEM216Q9P0N5 145 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 DMGDHQ9UI17 866 aaKnown RBP11.56□□□□□ -0.56
PTCH1-221ENST00000550914 PROCRQ9UNN8 238 aa11.56□□□□□ -0.56
PTCH1-221ENST00000550914 FBN1P35555 2871 aaKnown RBP11.55□□□□□ -0.56
PTCH1-221ENST00000550914 EXOC1LA0A1B0GW35 172 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 H0YC42 278 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 H3BML4 177 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 H3BQF6 201 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 UPK1AO00322 258 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 SEC14L5O43304 696 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 JUNP05412 331 aaKnown RBP11.55□□□□□ -0.56
PTCH1-221ENST00000550914 GSTA1P08263 222 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 ZNF17P17021 662 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 IL11P20809 199 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 ECHS1P30084 290 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 NTSP30990 170 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 TPD52P55327 224 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-221ENST00000550914 CLDN20P56880 219 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 NAA20P61599 178 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 PRR5P85299 388 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 C2orf80Q0P641 193 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 STX5Q13190 355 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 WHAMMP3Q1A5X7 153 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 BEX5Q5H9J7 111 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 SH2D4BQ5SQS7 431 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 FAM71E1Q6IPT2 247 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 TMEM107Q6UX40 140 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 IKBIPQ70UQ0 350 aa11.55□□□□□ -0.56
PTCH1-221ENST00000550914 CIARTQ8N365 385 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-221ENST00000550914 OR6K3Q8NGY3 331 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms